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04302015_20_scaffold_324

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_324_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..4785)
DNA (4785bp) protein (1595aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4N4_CAUSK
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:ABZ70986.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
outer membrane autotransporter putative
04302015_20_scaffold_324_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5111..5995
DNA (885bp) protein (295aa)
pip3; putative proline iminopeptidase protein; K01259 proline iminopeptidase [EC:3.4.11.5] rbh
Proline-specific peptidase n=6 Tax=Rhizobium meliloti RepID=F6BVE7_SINMB rbh
Proline iminopeptidase {ECO:0000313|EMBL:KGM34173.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
04302015_20_scaffold_324_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6050..6898
DNA (849bp) protein (283aa)
2-keto-4-pentenoate hydratase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IQD8_AZOC5
2-keto-4-pentenoate hydratase
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:BAF86767.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
04302015_20_scaffold_324_4
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6902..10147)
DNA (3246bp) protein (1082aa)
Collagen triple helix repeat protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FXP6_ACICJ
triple helix repeat-containing collagen
Collagen triple helix repeat protein {ECO:0000313|EMBL:ABQ30378.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_324_5
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10534..11469)
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] rbh
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
GDP-L-fucose synthase n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003769C00 rbh
04302015_20_scaffold_324_6
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11506..12489
DNA (984bp) protein (328aa)
Glycosyl transferase family 11 n=1 Tax=Rhizobium sp. CF080 RepID=J3C3T3_9RHIZ
Glycosyl transferase family 11 {ECO:0000313|EMBL:EUB98707.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
glycosyl transferase family protein
04302015_20_scaffold_324_7
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12491..13135)
DNA (645bp) protein (215aa)
Putative peptidase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YN53_9PROT
Putative peptidase {ECO:0000313|EMBL:EKN00272.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
putative peptidase S24
04302015_20_scaffold_324_8
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13485..13718
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZLM8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKN00271.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_20_scaffold_324_9
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13792..14652)
DNA (861bp) protein (287aa)
speE; spermidine synthase (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16]
Spermidine synthase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZLN4_9PROT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_324_10
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14872..15327)
DNA (456bp) protein (152aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00464};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
speH; S-adenosylmethionine decarboxylase (EC:4.1.1.50); K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50]
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XUH9_9PROT
04302015_20_scaffold_324_11
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15521..16318)
DNA (798bp) protein (266aa)
VacJ family lipoprotein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FV16_ACICJ
putative VacJ family lipoprotein; K04754 lipoprotein
VacJ family lipoprotein {ECO:0000313|EMBL:EGO94782.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_324_12
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16645..19290
DNA (2646bp) protein (882aa)
Alanine--tRNA ligase {ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|SAAS:SAAS00015673};; Flags: Fragment;; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanyl-tRNA ligase (Fragment) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZLK5_9PROT
04302015_20_scaffold_324_13
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19433..21019)
DNA (1587bp) protein (529aa)
D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-3-phosphoglycerate dehydrogenase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YZY8_9PROT
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:GAN82089.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_20_scaffold_324_14
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21032..22117)
DNA (1086bp) protein (362aa)
serC; phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52]
Phosphoserine aminotransferase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YZB2_9PROT
Phosphoserine aminotransferase {ECO:0000313|EMBL:GAN82088.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
Displaying 14 items

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