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04302015_20_scaffold_228

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Displaying items 1-30 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_228_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..114
DNA (114bp) protein (38aa)
Zinc finger, CHCC-type n=2 Tax=Thiomonas RepID=D5X6V8_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDW93970.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_20_scaffold_228_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128..1213
DNA (1086bp) protein (362aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] rbh
Lipopolysaccharide heptosyltransferase II n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6V7_THIK1 rbh
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:ADG32104.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1226..1672)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6V6_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG32103.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2048..2470
DNA (423bp) protein (141aa)
ATP synthase I chain n=2 Tax=Thiomonas RepID=D5X6V5_THIK1
hypothetical protein
ATP synthase I chain {ECO:0000313|EMBL:ADG32102.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2519..3379
DNA (861bp) protein (287aa)
putative ATP synthase a chain (ATPase protein 6) AtpB (EC:3.6.3.14) rbh
ATP synthase subunit a n=2 Tax=Thiomonas RepID=D5X6V4_THIK1 rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_20_scaffold_228_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3450..3698
DNA (249bp) protein (83aa)
atpE; ATP synthase C chain (Lipid-binding protein) (Dicyclohexylcarbodiimide-binding protein) (EC:3.6.3.14)
ATP synthase F0, C subunit n=3 Tax=root RepID=D5X6V3_THIK1
ATP synthase F0, C subunit {ECO:0000313|EMBL:ADG32100.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_7
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3755..4225
DNA (471bp) protein (157aa)
putative Sodium-transporting two-sector ATPase AtpF (EC:3.6.3.15)
ATP synthase subunit b n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMX4_THIA3
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_20_scaffold_228_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4238..4777
DNA (540bp) protein (180aa)
ATP synthase F1 subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] rbh
ATP synthase subunit delta n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6V1_THIK1 rbh
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4794..6335
DNA (1542bp) protein (514aa)
atpA; Sodium-transporting two-sector ATPase (EC:3.6.3.15) rbh
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
ATP synthase subunit alpha n=2 Tax=Thiomonas RepID=D5X6V0_THIK1 rbh
04302015_20_scaffold_228_10
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6403..7281
DNA (879bp) protein (293aa)
atpG; Sodium-transporting two-sector ATPase (EC:3.6.3.15) rbh
ATP synthase gamma chain n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMX1_THIA3 rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_228_11
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7319..8734
DNA (1416bp) protein (472aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
atpD; ATP synthase subunit beta, sodium ion specific (Na(+)-translocating ATPase subunit beta) (EC:3.6.3.15) rbh
ATP synthase subunit beta n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMX0_THIA3 rbh
04302015_20_scaffold_228_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8825..9259
DNA (435bp) protein (145aa)
atpC; ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit) (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMW9_THIA3
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_228_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9451..10608
DNA (1158bp) protein (386aa)
Rare lipoprotein A n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6U6_THIK1 rbh
rare lipoprotein A; K03642 rare lipoprotein A rbh
Rare lipoprotein A {ECO:0000313|EMBL:ADG32093.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_14
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10687..11067)
DNA (381bp) protein (127aa)
PsiF repeat protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6U5_THIK1
PsiF repeat protein
PsiF repeat protein {ECO:0000313|EMBL:ADG32092.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11237..12991
DNA (1755bp) protein (585aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:CAZ89894.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
putative arginyl-tRNA synthetase (ArgS) (EC:6.1.1.19) rbh
Arginine--tRNA ligase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMW6_THIA3 rbh
04302015_20_scaffold_228_16
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13043..13669
DNA (627bp) protein (209aa)
Sporulation domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6U3_THIK1 rbh
Sporulation domain-containing protein rbh
Sporulation domain protein {ECO:0000313|EMBL:ADG32090.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_17
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13705..14370
DNA (666bp) protein (222aa)
Thiol:disulfide interchange protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6U2_THIK1 rbh
DSBA oxidoreductase; K03673 thiol:disulfide interchange protein DsbA rbh
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_18
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14493..15128
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMW3_THIA3 rbh
conserved hypothetical protein OstA-like protein rbh
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_228_19
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15125..15979
DNA (855bp) protein (285aa)
ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] rbh
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6U0_THIK1 rbh
ABC transporter related protein {ECO:0000313|EMBL:ADG32087.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_20
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15986..17500
DNA (1515bp) protein (505aa)
RNA polymerase sigma-54 factor n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6T9_THIK1 rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor rbh
04302015_20_scaffold_228_21
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17621..18442
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6T8_THIK1 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW93997.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein rbh
04302015_20_scaffold_228_22
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18428..19984)
DNA (1557bp) protein (519aa)
Putative adenylate cyclase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMV9_THIA3 rbh
putative adenylate cyclase rbh
Putative adenylate cyclase {ECO:0000313|EMBL:CAZ89887.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_228_23
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20115..21074
DNA (960bp) protein (320aa)
Metallophosphoesterase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6T6_THIK1 rbh
Metallophosphoesterase {ECO:0000313|EMBL:CDW93999.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
metallophosphoesterase rbh
04302015_20_scaffold_228_24
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21071..22189
DNA (1119bp) protein (373aa)
Glycosyl transferase group 1 n=2 Tax=Thiomonas RepID=D5X6T5_THIK1 rbh
gtrA; Glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:CAZ89885.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_228_25
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22194..22613
DNA (420bp) protein (140aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107]
Diacylglycerol kinase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6T4_THIK1
Diacylglycerol kinase {ECO:0000313|EMBL:ADG32081.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_26
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22644..23090
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMV5_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89883.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_228_27
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23098..24063)
DNA (966bp) protein (322aa)
Magnesium and cobalt transport protein CorA n=2 Tax=Thiomonas RepID=D5X6T2_THIK1 rbh
corA; Magnesium transport protein rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_228_28
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24073..24492)
DNA (420bp) protein (140aa)
Putative patatin-like phospholipase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMV3_THIA3
Putative patatin-like phospholipase
Putative patatin-like phospholipase {ECO:0000313|EMBL:CAZ89881.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_228_29
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25317..26372)
DNA (1056bp) protein (352aa)
Putative Metallo-beta-lactamase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMV2_THIA3 rbh
Putative Metallo-beta-lactamase rbh
Putative Metallo-beta-lactamase {ECO:0000313|EMBL:CAZ89880.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_228_30
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26457..26861
DNA (405bp) protein (135aa)
Transcriptional regulator, MerR family n=2 Tax=Thiomonas RepID=D5X6S9_THIK1
Putative Bacterial regulatory protein, MerR {ECO:0000313|EMBL:CDW94008.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Bacterial regulatory protein, MerR
Displaying items 1-30 of 63 in total

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