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04302015_20_scaffold_244

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_244_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..823)
DNA (822bp) protein (274aa)
4-nitrobenzoate reductase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRQ9_THIA3
pnbA; 4-nitrobenzoate reductase
4-nitrobenzoate reductase {ECO:0000313|EMBL:CAZ87300.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_244_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

978..2021
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X559_THIK1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG29883.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_244_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2009..5968)
DNA (3960bp) protein (1320aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRQ7_THIA3 rbh
conserved hypothetical protein; putative exported protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ87298.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_244_4
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6080..7360
DNA (1281bp) protein (427aa)
Putative Na+/H+ antiporter NhaD and related arsenite permease n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRQ6_THIA3 rbh
Putative Na+/H+ antiporter NhaD and related arsenite permease {ECO:0000313|EMBL:CDW92439.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Na+/H+ antiporter NhaD and related arsenite permease rbh
04302015_20_scaffold_244_5
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7389..8294
DNA (906bp) protein (302aa)
putative 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31) rbh
Putative 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CAZ87296.1}; EC=1.1.1.31 {ECO:0000313|EMBL:CAZ87296.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRQ5_THIA3 rbh
04302015_20_scaffold_244_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8366..8896)
DNA (531bp) protein (177aa)
ppa; Inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase) (PPase) (EC:3.6.1.1) rbh
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Inorganic pyrophosphatase n=2 Tax=Thiomonas RepID=D5X555_THIK1 rbh
04302015_20_scaffold_244_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8933..9652)
DNA (720bp) protein (240aa)
Transport-associated protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X554_THIK1 rbh
transport-associated protein rbh
Transport-associated protein {ECO:0000313|EMBL:ADG29878.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_244_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9649..10248)
DNA (600bp) protein (200aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Phosphoheptose isomerase n=2 Tax=Thiomonas RepID=D5X553_THIK1 rbh
diaA; DnaA initiator-associating protein diaA rbh
04302015_20_scaffold_244_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10328..10711)
DNA (384bp) protein (128aa)
UPF0102 protein Tint_0470 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X552_THIK1
hypothetical protein; K07460 putative endonuclease
UPF0102 protein Tint_0470 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_244_10
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10776..11591
DNA (816bp) protein (272aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] rbh
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X551_THIK1 rbh
04302015_20_scaffold_244_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11618..13876)
DNA (2259bp) protein (753aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X550_THIK1 rbh
PAS/PAC sensor-containing diguanylate cyclase rbh
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ADG29874.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_244_12
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14240..15085
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X549_THIK1 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW92447.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein rbh
04302015_20_scaffold_244_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15244..15741
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X548_THIK1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG29872.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_244_14
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16001..17959
DNA (1959bp) protein (653aa)
parE; DNA topoisomerase 4 subunit B (Topoisomerase IV subunit B) (EC:5.99.1.-) rbh
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
DNA topoisomerase 4 subunit B n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRP6_THIA3 rbh
04302015_20_scaffold_244_15
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17961..20294
DNA (2334bp) protein (778aa)
DNA topoisomerase IV subunit A (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-] rbh
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
DNA topoisomerase 4 subunit A n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X546_THIK1 rbh
04302015_20_scaffold_244_16
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20360..20896)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRP4_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW92451.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Conserved hypothetical protein; putative OmpA/MotB domain
04302015_20_scaffold_244_17
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20972..21490)
DNA (519bp) protein (173aa)
GCN5-related N-acetyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X545_THIK1
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDW92452.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
N-acetyltransferase GCN5
04302015_20_scaffold_244_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21576..22028)
DNA (453bp) protein (151aa)
Endoribonuclease L-PSP n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X544_THIK1
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADG29868.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_244_19
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22149..23645)
DNA (1497bp) protein (499aa)
Peptidase S1 n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRP0_THIA3 rbh
Peptidase S1 rbh
Peptidase S1 {ECO:0000313|EMBL:CAZ87281.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_244_20
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23775..24530
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRN9_THIA3 rbh
conserved hypothetical protein; putative exported protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ87280.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_244_21
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24627..25502
DNA (876bp) protein (292aa)
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10] rbh
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Formyltetrahydrofolate deformylase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X541_THIK1 rbh
04302015_20_scaffold_244_22
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25528..25980
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X540_THIK1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW92458.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_20_scaffold_244_23
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26027..27016
DNA (990bp) protein (330aa)
Alpha/beta hydrolase fold protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X539_THIK1 rbh
alpha/beta hydrolase fold protein; K07019 rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADG29863.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_244_24
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27020..27589
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRN5_THIA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW92460.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein rbh
04302015_20_scaffold_244_25
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27664..28296)
DNA (633bp) protein (211aa)
Putative Cytochrome c n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRN4_THIA3 rbh
Putative Cytochrome c {ECO:0000313|EMBL:CDW92461.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
cytochrome c class I rbh
04302015_20_scaffold_244_26
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28778..28954)
DNA (177bp) protein (59aa)
Transposase IstA n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X536_THIK1
transposase IstA
Transposase IstA {ECO:0000313|EMBL:ADG29860.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Displaying 26 items

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