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04302015_20_scaffold_289

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_289_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..626)
DNA (624bp) protein (208aa)
putative DNA-3-methyladenine glycosylase II (EC:3.2.2.21) rbh
Putative DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:CAZ87193.1}; EC=3.2.2.21 {ECO:0000313|EMBL:CAZ87193.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative DNA-3-methyladenine glycosylase II n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRF2_THIA3 rbh
04302015_20_scaffold_289_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(626..2008)
DNA (1383bp) protein (461aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] rbh
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Cysteine--tRNA ligase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X509_THIK1 rbh
04302015_20_scaffold_289_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2185..3279
DNA (1095bp) protein (365aa)
TPR repeat-containing protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X508_THIK1 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW92652.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein rbh
04302015_20_scaffold_289_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3348..4691
DNA (1344bp) protein (448aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X507_THIK1 rbh
ErfK/YbiS/YcfS/YnhG family protein rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ADG29831.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_289_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4691..5335
DNA (645bp) protein (215aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Peptidylprolyl isomerase (EC:5.2.1.8); K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] rbh
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X506_THIK1 rbh
04302015_20_scaffold_289_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5358..5849
DNA (492bp) protein (164aa)
ppiB; Peptidyl-prolyl cis-trans isomerase B (PPIase B) (Rotamase B) (EC:5.2.1.8) rbh
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRE7_THIA3 rbh
04302015_20_scaffold_289_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5901..6764
DNA (864bp) protein (288aa)
UDP-2,3-diacylglucosamine hydrolase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] rbh
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X504_THIK1 rbh
04302015_20_scaffold_289_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6886..7434
DNA (549bp) protein (183aa)
Putative pseudopilin PulG n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRE5_THIA3 rbh
putative pseudopilin PulG rbh
Putative pseudopilin PulG {ECO:0000313|EMBL:CAZ87186.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_289_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7406..7933
DNA (528bp) protein (176aa)
Putative Tfp pilus assembly protein PilV n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRE4_THIA3
putative Tfp pilus assembly protein PilV
Putative Tfp pilus assembly protein PilV {ECO:0000313|EMBL:CAZ87185.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_289_10
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7930..8970
DNA (1041bp) protein (347aa)
Putative Tfp pilus assembly protein PilW n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRE3_THIA3 rbh
putative Tfp pilus assembly protein PilW rbh
Putative Tfp pilus assembly protein PilW {ECO:0000313|EMBL:CAZ87184.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_289_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8974..9561
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRE2_THIA3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ87183.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_289_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9614..13384
DNA (3771bp) protein (1257aa)
Putative Tfp pilus assembly protein, tip-associated adhesin PilY1 n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRE1_THIA3 rbh
putative Tfp pilus assembly protein, tip-associated adhesin PilY1 rbh
Putative Tfp pilus assembly protein, tip-associated adhesin PilY1 {ECO:0000313|EMBL:CAZ87182.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_289_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13399..13866
DNA (468bp) protein (156aa)
Putative pseudopilin PulG n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRE0_THIA3 rbh
putative pseudopilin PulG rbh
Putative pseudopilin PulG {ECO:0000313|EMBL:CAZ87181.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_289_14
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13968..14543
DNA (576bp) protein (192aa)
Putative Tfp pilus assembly protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRD9_THIA3 rbh
putative Tfp pilus assembly protein rbh
Putative Tfp pilus assembly protein {ECO:0000313|EMBL:CAZ87180.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_289_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14563..15813
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRD8_THIA3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ87179.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_289_16
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15924..17444
DNA (1521bp) protein (507aa)
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] rbh
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Lysine--tRNA ligase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X4Z5_THIK1 rbh
04302015_20_scaffold_289_17
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17450..18394
DNA (945bp) protein (315aa)
PfkB domain-containing protein; K00856 adenosine kinase [EC:2.7.1.20] rbh
PfkB domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X4Z4_THIK1 rbh
PfkB domain protein {ECO:0000313|EMBL:ADG29818.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_289_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18532..19233
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Thiomonas RepID=D6CRD5_THIA3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG29817.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_289_19
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19297..20709)
DNA (1413bp) protein (471aa)
putative 23S rRNA (Uracil-5-)-methyltransferase rumA (23S rRNA(M-5-U1939)-methyltransferase) (EC:2.1.1.-) rbh
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRD4_THIA3 rbh
04302015_20_scaffold_289_20
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20729..21538)
DNA (810bp) protein (270aa)
Putative DNA polymerase elongation subunit (Family B) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRD3_THIA3 rbh
putative DNA polymerase elongation subunit (family B) rbh
Putative DNA polymerase elongation subunit (Family B) {ECO:0000313|EMBL:CAZ87174.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_289_21
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21597..22652)
DNA (1056bp) protein (352aa)
RNA polymerase sigma factor RpoS n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X4Z0_THIK1 rbh
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor rbh
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_289_22
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22661..23626)
DNA (966bp) protein (322aa)
Peptidase M23 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X4Y9_THIK1 rbh
peptidase M23; K06194 lipoprotein NlpD rbh
Peptidase M23 {ECO:0000313|EMBL:ADG29813.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_289_23
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23656..24198)
DNA (543bp) protein (181aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:CDW92673.1}; EC=2.1.1.77 {ECO:0000313|EMBL:CDW92673.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X4Y8_THIK1
Displaying 23 items

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