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04302015_20_scaffold_366

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_366_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..94
DNA (93bp) protein (31aa)
Transposase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2V3_THIK1
transposase
Transposase {ECO:0000313|EMBL:ADG29451.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_366_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159..1154)
DNA (996bp) protein (332aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6I2_THIK1 rbh
C4-dicarboxylate transporter/malic acid transport protein; K03304 tellurite resistance/dicarboxylate transporter, TDT family rbh
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:ADG30109.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_366_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1312..1950
DNA (639bp) protein (213aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] rbh
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6I3_THIK1 rbh
04302015_20_scaffold_366_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1967..2350)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6I4_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG30111.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_366_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2392..2982
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6I5_THIK1 rbh
hypothetical protein; K03805 thiol:disulfide interchange protein DsbG rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG30112.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_366_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2992..5040)
DNA (2049bp) protein (683aa)
TonB-dependent receptor n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6I6_THIK1 rbh
Putative Porin {ECO:0000313|EMBL:CDW94331.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
04302015_20_scaffold_366_7
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5450..6532)
DNA (1083bp) protein (361aa)
Putative HPP family protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS80_THIA3 rbh
Putative HPP family protein rbh
Putative HPP family protein {ECO:0000313|EMBL:CAZ87608.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_366_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6529..7092)
DNA (564bp) protein (188aa)
Putative Peptide methionine sulfoxide reductase (MsrA) (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase) (EC:1.8.4.11) rbh
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401, ECO:0000313|EMBL:CAZ87609.1};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS81_THIA3 rbh
04302015_20_scaffold_366_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7232..7750
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS82_THIA3 rbh
Conserved hypothetical protein; putative exported protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ87610.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_366_10
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8043..9596)
DNA (1554bp) protein (518aa)
UbiD family decarboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] rbh
UbiD family decarboxylase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6J0_THIK1 rbh
UbiD family decarboxylase {ECO:0000313|EMBL:ADG30117.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_366_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9902..10765
DNA (864bp) protein (288aa)
Lytic transglycosylase catalytic n=2 Tax=Thiomonas RepID=D5X6J1_THIK1 rbh
Putative Lytic transglycosylase, catalytic rbh
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADG30118.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_366_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10982..12229
DNA (1248bp) protein (416aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Serine hydroxymethyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6J2_THIK1 rbh
04302015_20_scaffold_366_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12217..12954)
DNA (738bp) protein (246aa)
Putative Acyl-CoA N-acyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS87_THIA3 rbh
Putative Acyl-CoA N-acyltransferase rbh
Putative Acyl-CoA N-acyltransferase {ECO:0000313|EMBL:CAZ87615.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_366_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12983..17029)
DNA (4047bp) protein (1349aa)
Fused DNA-binding transcriptional regulator proline dehydrogenase pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:CDW94319.1}; EC=1.2.1.88 {ECO:0000313|EMBL:CDW94319.1};; EC=1.5.5.2 {ECO:0000313|EMBL:CDW94319.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
delta-1-pyrroline-5-carboxylate dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] rbh
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6J4_THIK1 rbh
04302015_20_scaffold_366_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17187..17660
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS89_THIA3 rbh
conserved hypothetical protein; Putative cAMP-binding domain rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ87617.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_366_16
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17869..19290
DNA (1422bp) protein (474aa)
Putative signal transduction protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6J6_THIK1 rbh
Putative signal transduction protein {ECO:0000313|EMBL:CDW93697.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative signal transduction protein rbh
04302015_20_scaffold_366_17
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19298..19921)
DNA (624bp) protein (208aa)
Putative LysE type translocator n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CS90_THIA3 rbh
Putative LysE type translocator {ECO:0000313|EMBL:CDW93695.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Putative LysE type translocator rbh
Displaying 17 items

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