ggKbase home page

04302015_20_scaffold_392

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_392_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(294..1097)
DNA (804bp) protein (268aa)
Putative Nuclease {ECO:0000313|EMBL:CDW95525.1}; EC=4.2.99.18 {ECO:0000313|EMBL:CDW95525.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
exodeoxyribonuclease III Xth (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III Xth n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0R7_THIK1 rbh
04302015_20_scaffold_392_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1263..1883
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSQ7_THIA3 rbh
conserved hypothetical protein; putative exported protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ88326.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_392_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1926..2369)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSQ6_THIA3
hypothetical protein; putative exported protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ88325.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_392_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2600..3148)
DNA (549bp) protein (183aa)
Inner membrane protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSQ5_THIA3 rbh
yaaH; Inner membrane protein rbh
Inner membrane protein {ECO:0000313|EMBL:CAZ88324.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_392_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3391..4197
DNA (807bp) protein (269aa)
Putative permease n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSQ4_THIA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW95518.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative permease rbh
04302015_20_scaffold_392_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4331..4828
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0R2_THIK1 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW95516.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein rbh
04302015_20_scaffold_392_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4863..6263)
DNA (1401bp) protein (467aa)
MiaB-like tRNA modifying enzyme YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=75379 species="Bacteria; Prot
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0R1_THIK1 rbh
04302015_20_scaffold_392_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6324..6869)
DNA (546bp) protein (182aa)
Polyhydroxyalkonate synthesis repressor, PhaR n=2 Tax=Thiomonas RepID=D5X0R0_THIK1 rbh
phaD; Polyhydroxyalkanoate synthesis repressor rbh
Polyhydroxyalkonate synthesis repressor, PhaR {ECO:0000313|EMBL:ADG30706.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_392_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6995..7735)
DNA (741bp) protein (247aa)
acetoacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36] rbh
Acetoacetyl-CoA reductase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0Q9_THIK1 rbh
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:ADG30705.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_392_10
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7784..8962)
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADG30704.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ADG30704.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Acetyl-CoA acetyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0Q8_THIK1
04302015_20_scaffold_392_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8997..10646)
DNA (1650bp) protein (550aa)
poly(R)-hydroxyalkanoic acid synthase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Poly(R)-hydroxyalkanoic acid synthase, class I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X0Q7_THIK1 rbh
Poly(R)-hydroxyalkanoic acid synthase, class I {ECO:0000313|EMBL:ADG30703.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_392_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11244..11774
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUN9_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89008.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_392_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11771..13867
DNA (2097bp) protein (699aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUP0_THIA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ89009.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
hypothetical protein; putative EAL, GGDEF and PAS/PAC domains rbh
04302015_20_scaffold_392_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13869..14423
DNA (555bp) protein (185aa)
Putative Pili subunit, PilE n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUP1_THIA3 rbh
Putative Pili subunit, PilE {ECO:0000313|EMBL:CDW95036.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Pili subunit, PilE rbh
04302015_20_scaffold_392_15
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14427..14822
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUP2_THIA3
Uncharacterized protein {ECO:0000313|EMBL:CDW95035.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein; putative forkhead-associated (FHA) domain
04302015_20_scaffold_392_16
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14819..16387
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUP3_THIA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW95034.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein rbh
04302015_20_scaffold_392_17
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16430..17209
DNA (780bp) protein (260aa)
Putative Beta-lactamase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUP4_THIA3 rbh
putative Beta-lactamase rbh
Putative Beta-lactamase {ECO:0000313|EMBL:CAZ89013.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_392_18
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17306..19111
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUP5_THIA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW95032.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein; putative exported protein; putative PAS, GGDEF domain, EAL and GAF domains rbh
04302015_20_scaffold_392_19
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19128..20021
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUP5_THIA3
hypothetical protein; putative exported protein; putative PAS, GGDEF domain, EAL and GAF domains
Uncharacterized protein {ECO:0000313|EMBL:CAZ89014.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Displaying 19 items

View Taxonomy