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04302015_20_scaffold_469

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_469_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..327)
DNA (327bp) protein (109aa)
50S ribosomal protein L18 n=2 Tax=Thiomonas RepID=D5X644_THIK1
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_469_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(339..872)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X645_THIK1 rbh
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_469_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(886..1284)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Thiomonas RepID=D5X646_THIK1
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302, ECO:0000313|EMBL:CAZ89629.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_469_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1376..1681)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=2 Tax=Thiomonas RepID=D5X647_THIK1
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_469_5
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1691..2230)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Thiomonas RepID=D5X648_THIK1 rbh
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_469_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2242..2559)
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X649_THIK1
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_20_scaffold_469_7
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2593..2961)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Thiomonas RepID=D5X650_THIK1
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_469_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3208..3495)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X651_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31968.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_469_9
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3678..4985
DNA (1308bp) protein (436aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hemA; Glutamyl-tRNA reductase (GluTR) (EC:1.2.1.70) rbh
Glutamyl-tRNA reductase n=2 Tax=Thiomonas RepID=D5X652_THIK1 rbh
04302015_20_scaffold_469_10
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5079..6155
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X653_THIK1 rbh
peptide chain release factor 1; K02835 peptide chain release factor 1 rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_469_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6157..7077
DNA (921bp) protein (307aa)
putative Protein methyltransferase hemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) (EC:2.1.1.-) rbh
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas
Release factor glutamine methyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CM59_THIA3 rbh
04302015_20_scaffold_469_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7113..7430
DNA (318bp) protein (106aa)
Glutaredoxin n=2 Tax=Thiomonas RepID=D5X655_THIK1
glutaredoxin-like protein; K07390 monothiol glutaredoxin
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_469_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7487..8065
DNA (579bp) protein (193aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] rbh
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X656_THIK1 rbh
04302015_20_scaffold_469_14
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8236..9429
DNA (1194bp) protein (398aa)
Putative Polyphosphate kinase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CM62_THIA3 rbh
Putative Polyphosphate kinase {ECO:0000313|EMBL:CDW94129.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Polyphosphate kinase rbh
04302015_20_scaffold_469_15
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9453..9899)
DNA (447bp) protein (149aa)
Histidine triad (HIT) protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X658_THIK1
Histidine triad (HIT) protein {ECO:0000313|EMBL:CDW94128.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
histidine triad (HIT) protein
04302015_20_scaffold_469_16
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9903..10637)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CM64_THIA3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ89642.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_469_17
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10634..11197)
DNA (564bp) protein (188aa)
Putative RNA polymerase sigma factor n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CM65_THIA3 rbh
putative RNA polymerase sigma factor rbh
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CDW94125.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_20_scaffold_469_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11326..11949)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X661_THIK1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG31978.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_469_19
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12191..13951
DNA (1761bp) protein (587aa)
Cytochrome c family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X662_THIK1 rbh
Cytochrome c family protein {ECO:0000313|EMBL:CDW94123.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
cytochrome c family protein rbh
04302015_20_scaffold_469_20
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14000..14689
DNA (690bp) protein (230aa)
Putative Transmembrane di-heme cytochrome n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CM68_THIA3 rbh
putative Transmembrane di-heme cytochrome rbh
Putative Transmembrane di-heme cytochrome {ECO:0000313|EMBL:CAZ89646.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_469_21
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14690..15307)
DNA (618bp) protein (206aa)
nicotinamidase (EC:3.5.1.19); K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] rbh
Nicotinamidase {ECO:0000313|EMBL:ADG31981.1}; EC=3.5.1.19 {ECO:0000313|EMBL:ADG31981.1};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Nicotinamidase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X664_THIK1 rbh
04302015_20_scaffold_469_22
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15310..16686)
DNA (1377bp) protein (459aa)
putative D-lactate dehydrogenase (cytochrome) (EC:1.1.2.4)
Putative D-lactate dehydrogenase (Cytochrome) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CM70_THIA3
FAD linked oxidase domain protein {ECO:0000313|EMBL:CDW94119.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_20_scaffold_469_23
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16626..19115)
DNA (2490bp) protein (830aa)
FAD linked oxidase domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X665_THIK1 rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADG31982.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
FAD linked oxidase domain-containing protein rbh
04302015_20_scaffold_469_24
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19288..20559
DNA (1272bp) protein (424aa)
Putative Metal-dependent phosphohydrolase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CM71_THIA3
putative Metal-dependent phosphohydrolase
Putative Metal-dependent phosphohydrolase {ECO:0000313|EMBL:CAZ89649.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_469_25
unknown

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20546..20938
DNA (393bp) protein (131aa)

This feature has no annotations

Displaying 25 items

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