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04302015_20_scaffold_1358

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_1358_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..900
DNA (900bp) protein (300aa)
Regulatory protein MerR n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5E8_THIK1
MerR family transcriptional regulator
Regulatory protein MerR {ECO:0000313|EMBL:CDW94295.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_20_scaffold_1358_2
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(908..2320)
DNA (1413bp) protein (471aa)
Cl-channel voltage-gated family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5E7_THIK1
Putative chloride channel protein ClcB-like {ECO:0000313|EMBL:CDW94296.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Cl-channel voltage-gated family protein; K03281 chloride channel protein, CIC family
04302015_20_scaffold_1358_3
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2480..2959
DNA (480bp) protein (160aa)
RfaE bifunctional protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5E6_THIK1
RfaE bifunctional protein {ECO:0000313|EMBL:CDW94297.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
rfaE bifunctional protein
04302015_20_scaffold_1358_4
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2956..3438
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLS6_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89504.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
04302015_20_scaffold_1358_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3540..3842
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=2 Tax=Thiomonas RepID=D5X5E4_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31837.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_1358_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3854..4249
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5E3_THIK1
Uncharacterized protein {ECO:0000313|EMBL:CDW94300.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
04302015_20_scaffold_1358_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4261..4647
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5E2_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31835.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_1358_8

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4823..4996
DNA (174bp) protein (58aa)
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:CBH97802.1}; EC=1.1.1.36 {ECO:0000313|EMBL:CBH97802.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phbB; acetoacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
Acetoacetyl-CoA reductase n=1 Tax=mine drainage metagenome RepID=E6PS96_9ZZZZ
04302015_20_scaffold_1358_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5074..5424
DNA (351bp) protein (117aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X245_THIK1
alkylhydroperoxidase
04302015_20_scaffold_1358_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5508..6938
DNA (1431bp) protein (477aa)
F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] rbh
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
ATP synthase subunit beta n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QG20_RHOPT rbh
04302015_20_scaffold_1358_11

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6935..7267
DNA (333bp) protein (111aa)
F0F1 ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase F1, epsilon subunit n=3 Tax=mine drainage metagenome RepID=T0YLI0_9ZZZZ
ATP synthase F1, epsilon subunit {ECO:0000313|EMBL:EQD36296.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 11 items

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