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04302015_21_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_58_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..381
DNA (381bp) protein (127aa)
Transposase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3V5_9PROT
Transposase {ECO:0000313|EMBL:CAM77562.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
ISMca6, transposase, OrfB
04302015_21_scaffold_58_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370..588)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDE8_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66041.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
04302015_21_scaffold_58_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1231..3918)
DNA (2688bp) protein (896aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037F2B66 rbh
DNA double-strand break repair Rad50 ATPase {ECO:0000313|EMBL:EJW10599.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein rbh
04302015_21_scaffold_58_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3923..5041)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037FCFE8 rbh
DNA double-strand break repair protein Mre11 {ECO:0000313|EMBL:EJW10598.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
metallophosphoesterase
04302015_21_scaffold_58_5
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5247..7916)
DNA (2670bp) protein (890aa)
Helicase/SNF2 family domain protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S9Q8_9BRAD rbh
Helicase/SNF2 family domain protein {ECO:0000313|EMBL:CCD90935.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
type III restriction enzyme, res subunit rbh
04302015_21_scaffold_58_6
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7913..15421)
DNA (7509bp) protein (2503aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S9Q6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD90933.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
hypothetical protein rbh
04302015_21_scaffold_58_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15541..16425)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXZ4_9PROT
COGs COG2378 {ECO:0000313|EMBL:CDP52012.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
04302015_21_scaffold_58_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16567..19227
DNA (2661bp) protein (887aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N7P1_RHOPA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAE27657.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
04302015_21_scaffold_58_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19227..22634
DNA (3408bp) protein (1136aa)
ATP-dependent exodeoxyribonuclease subunit A (EC:3.1.11.5); K01144 exodeoxyribonuclease V [EC:3.1.11.5] rbh
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
Possible ATP-dependent exodeoxyribonuclease (Subunit A) n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N7P2_RHOPA rbh
04302015_21_scaffold_58_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22655..23557)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0C4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ34314.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein rbh
04302015_21_scaffold_58_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23554..23877)
DNA (324bp) protein (108aa)
XRE family transcriptional regulator n=1 Tax=Asticcacaulis benevestitus RepID=UPI0003804098
Helix-turn-helix motif protein {ECO:0000313|EMBL:EAQ34315.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
sinR; helix-turn-helix family protein
04302015_21_scaffold_58_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24135..25322
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003815971 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79812.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
04302015_21_scaffold_58_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25325..25840
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000367B276
Uncharacterized protein {ECO:0000313|EMBL:EKS31070.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
04302015_21_scaffold_58_14
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25840..27039
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G6C3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY23262.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
hypothetical protein rbh
04302015_21_scaffold_58_15
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27036..28481
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002485192 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY28247.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein rbh
04302015_21_scaffold_58_16
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28619..29539)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BC13_9RHIZ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGK59807.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
04302015_21_scaffold_58_17
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29529..30149)
DNA (621bp) protein (207aa)
Bll1928 protein n=2 Tax=Bradyrhizobium RepID=H7C6F0_BRADU
hypothetical protein
ID481 {ECO:0000313|EMBL:AAG60905.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
04302015_21_scaffold_58_18
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30377..31339
DNA (963bp) protein (321aa)
Putative ardC antirestriction protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMS7_TISMK rbh
putative ardC antirestriction protein rbh
Putative ardC antirestriction protein {ECO:0000313|EMBL:AFK54065.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
04302015_21_scaffold_58_19
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31491..33581
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D662_BRAJP rbh
hypothetical protein; K03497 chromosome partitioning protein, ParB family rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL07330.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
04302015_21_scaffold_58_20
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33689..34168
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BC06_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59802.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
04302015_21_scaffold_58_21
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34179..34541
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPR1_SPHAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF54361.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
04302015_21_scaffold_58_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34613..35359
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKU3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26808.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
04302015_21_scaffold_58_23
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35439..36035
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMS1_TISMK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK54059.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
04302015_21_scaffold_58_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36205..40551
DNA (4347bp) protein (1449aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7R5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38622.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
methylase/helicase rbh
04302015_21_scaffold_58_25

Not on your lists

40554..41594
DNA (1041bp) protein (347aa)
DNA primase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313A906 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN19173.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
04302015_21_scaffold_58_26
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41898..42869
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4X9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC64486.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein rbh
04302015_21_scaffold_58_27
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43266..44159
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS35_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDV24651.1}; TaxID=1395570 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia JBK9.;"
04302015_21_scaffold_58_28
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44156..45301
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4M6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EHS52297.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein rbh
04302015_21_scaffold_58_29
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45313..46074)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTG1_THIA3
Uncharacterized protein {ECO:0000313|EMBL:KHK52056.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein
04302015_21_scaffold_58_30
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46559..46732
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000314D788
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI52521.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
Displaying items 1-30 of 32 in total

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