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04302015_21_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_92_1
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..743)
DNA (741bp) protein (247aa)
Glycosyl transferase 2 family protein n=11 Tax=Escherichia coli RepID=M8LEX6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AJC20341.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
glycosyl transferase family protein
04302015_21_scaffold_92_2
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(736..1986)
DNA (1251bp) protein (417aa)
Uncharacterized protein {ECO:0000313|EMBL:AJC20342.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
04302015_21_scaffold_92_3
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2087..3190)
DNA (1104bp) protein (368aa)
Aminotransferase DegT n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1A7W0_9NEIS rbh
Erythromycin biosynthesis sensory transduction protein eryC1 {ECO:0000313|EMBL:AJC20343.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
DegT/DnrJ/EryC1/StrS aminotransferase
04302015_21_scaffold_92_4
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3192..4046)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Pectobacterium wasabiae CFBP 3304 RepID=J8PUJ6_9ENTR rbh
GNAT family acetyltransferase {ECO:0000313|EMBL:AJC23141.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
hypothetical protein
04302015_21_scaffold_92_5
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4049..4981)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034B9493 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC20344.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
hypothetical protein rbh
04302015_21_scaffold_92_6
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4993..5661)
DNA (669bp) protein (223aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Pseudomonas sp. GM102 RepID=J3DYR6_9PSED rbh
Sugar O-acyltransferase {ECO:0000313|EMBL:AJC20345.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family rbh
04302015_21_scaffold_92_7
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5651..6064)
DNA (414bp) protein (138aa)
FdtA n=2 Tax=Cronobacter muytjensii RepID=F8SLM8_9ENTR
dTDP-6-deoxy-3,4-keto-hexulose isomerase {ECO:0000313|EMBL:AJC20346.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
WxcM domain-containing protein domain-containing protein
04302015_21_scaffold_92_8
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6156..7031)
DNA (876bp) protein (292aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
rfbA_2; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24) rbh
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7U4_9GAMM rbh
04302015_21_scaffold_92_9
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7024..8094)
DNA (1071bp) protein (357aa)
rmlB; dTDP-D-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] rbh
dTDP-glucose 4,6-dehydratase n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GUK4_PSEAI rbh
Tax=BJP_IG2103_Dechloromonas_60_92
04302015_21_scaffold_92_10
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8108..9136)
DNA (1029bp) protein (343aa)
wbpP; WbpP; K02473 UDP-N-acetylglucosamine 4-epimerase [EC:5.1.3.7] rbh
WbpP n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZP8_AROAE rbh
WbpP {ECO:0000313|EMBL:CAI09466.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
04302015_21_scaffold_92_11
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9139..10413)
DNA (1275bp) protein (425aa)
UDP-glucose/GDP-mannose dehydrogenase-like protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PXQ2_9RHOO rbh
wbpO; UDP-glucose/GDP-mannose dehydrogenase-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
04302015_21_scaffold_92_12
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10403..10612)
DNA (210bp) protein (70aa)
MarR family transcriptional regulator n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CNM0_9BURK
MarR family transcriptional regulator {ECO:0000313|EMBL:EIJ45213.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
MarR family transcriptional regulator
04302015_21_scaffold_92_13
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10774..11271)
DNA (498bp) protein (166aa)
Transcription antitermination protein RfaH n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82X31_NITEU
Transcription antitermination protein RfaH {ECO:0000256|HAMAP-Rule:MF_00951}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
rfaH; transcriptional activator; K05785 transcriptional antiterminator RfaH
04302015_21_scaffold_92_14
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11373..12266)
DNA (894bp) protein (298aa)
transposase n=1 Tax=Acidovorax avenae RepID=UPI0003654FB1 rbh
integrase catalytic region rbh
Integrase catalytic region {ECO:0000313|EMBL:ADX47595.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
04302015_21_scaffold_92_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12263..12655)
DNA (393bp) protein (131aa)
Transposase IS3/IS911 family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWX6_VARPE
IS2 ORF1 {ECO:0000313|EMBL:GAO24299.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
transposase is3/is911 family protein
04302015_21_scaffold_92_16
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12746..13561)
DNA (816bp) protein (272aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T3Q1_JANMA
Plasmid stablization protein ParB {ECO:0000313|EMBL:KGL00959.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
hypothetical protein
04302015_21_scaffold_92_17
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13530..13784)
DNA (255bp) protein (85aa)
Plasmid stablization protein ParB {ECO:0000313|EMBL:KGK99993.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
04302015_21_scaffold_92_18
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13781..14680)
DNA (900bp) protein (300aa)
ParB-like partition protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T3Z3_BURSG
parB-like partition protein; K03497 chromosome partitioning protein, ParB family
ParB-like partition protein {ECO:0000313|EMBL:ADN56041.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
04302015_21_scaffold_92_19
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14742..16286)
DNA (1545bp) protein (515aa)
Serine recombinase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UI70_9BURK rbh
Serine recombinase {ECO:0000313|EMBL:KGL00958.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
recombinase
04302015_21_scaffold_92_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16391..17281)
DNA (891bp) protein (297aa)
Transcription antitermination protein RfaH n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82X31_NITEU
rfaH; transcriptional activator; K05785 transcriptional antiterminator RfaH
Tax=CG_Rhodof_04
04302015_21_scaffold_92_21
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17410..17934)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. RB-44 RepID=V5UMS5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:BAP88830.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
04302015_21_scaffold_92_22
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17931..18395)
DNA (465bp) protein (155aa)
Putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PSQ3_9BURK
Putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain {ECO:0000313|EMBL:ELX13863.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
04302015_21_scaffold_92_23
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18392..18775)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8ND14_RALSL
Uncharacterized protein {ECO:0000313|EMBL:EXI77120.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
04302015_21_scaffold_92_24
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18844..21138)
DNA (2295bp) protein (765aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JIV9_BURVG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABO56212.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
04302015_21_scaffold_92_25
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21135..21557)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JIW0_BURVG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO56213.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
04302015_21_scaffold_92_26
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21554..22096)
DNA (543bp) protein (181aa)
Transcriptional regulator n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4W0G8_9PROT
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGH98934.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
04302015_21_scaffold_92_27
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22089..23450)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000372B4A2 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHB78648.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
putative Fe-S oxidoreductase rbh
04302015_21_scaffold_92_28
unknown

Not on your lists

comp(23450..23653)
DNA (204bp) protein (68aa)

This feature has no annotations

04302015_21_scaffold_92_29
unknown

Not on your lists

comp(23666..24331)
DNA (666bp) protein (222aa)

This feature has no annotations

04302015_21_scaffold_92_30
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24324..24911)
DNA (588bp) protein (196aa)
Prolyl 4-hydroxylase subunit alpha n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DZ92_9GAMM
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Displaying items 1-30 of 79 in total

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