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04302015_21_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_101_1
unknown

Not on your lists

comp(54..548)
DNA (495bp) protein (165aa)

This feature has no annotations

04302015_21_scaffold_101_2
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1016..1660
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0I623_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB05094.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
plasmid pRiA4b ORF-3 family protein rbh
04302015_21_scaffold_101_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1780..1974
DNA (195bp) protein (65aa)
Prevent-host-death protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUJ2_NITWN
prevent-host-death protein
Prevent-host-death protein {ECO:0000313|EMBL:ABA04049.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
04302015_21_scaffold_101_4
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2101..2922
DNA (822bp) protein (274aa)
hsdM; type I restriction enzyme M protein; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Type I restriction enzyme M protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNN5_DESMR
Type I DNA methyltransferase M subunit {ECO:0000313|EMBL:GAN78777.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_101_5
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2988..5342)
DNA (2355bp) protein (785aa)
copA; cation transport ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Copper-transporting P-type ATPase n=1 Tax=Roseomonas sp. B5 RepID=UPI0003002748
Heavy metal transporter ATPase {ECO:0000313|EMBL:GAN80615.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_101_6
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5381..5731
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000382A8D8
Uncharacterized protein {ECO:0000313|EMBL:GAN80616.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_21_scaffold_101_7
unknown

Not on your lists

5731..6159
DNA (429bp) protein (143aa)

This feature has no annotations

04302015_21_scaffold_101_8
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6277..7701
DNA (1425bp) protein (475aa)
Putative multicopper oxidase (Laccase-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7B9_AZOL4
Multicopper oxidase {ECO:0000313|EMBL:GAN80618.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
putative multicopper oxidase (laccase-like)
04302015_21_scaffold_101_9
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7800..8234
DNA (435bp) protein (145aa)
Membrane protein-like protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YUH2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN80619.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_101_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8261..8647
DNA (387bp) protein (129aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_21_scaffold_101_11
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9190..9846
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G2Y1_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:GAN80510.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_21_scaffold_101_12
unknown

Not on your lists

9996..10118
DNA (123bp) protein (41aa)

This feature has no annotations

04302015_21_scaffold_101_13
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10142..10528
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GXW8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB05557.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
04302015_21_scaffold_101_14
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10754..11455)
DNA (702bp) protein (234aa)
MgtC/SapB transporter n=1 Tax=Acidiphilium sp. PM RepID=F7SCB5_9PROT
MgtC/SapB transporter {ECO:0000313|EMBL:EGO93205.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
04302015_21_scaffold_101_15
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11700..11981)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7SAK8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGO93828.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein
04302015_21_scaffold_101_16
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11994..13370)
DNA (1377bp) protein (459aa)
Natural resistance-associated macrophage protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FU80_ACICJ
natural resistance-associated macrophage protein
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:ABQ29162.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_101_17
unknown

Not on your lists

comp(13431..13634)
DNA (204bp) protein (68aa)

This feature has no annotations

04302015_21_scaffold_101_18
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13856..14206
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5FU79_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ29161.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_101_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14258..16135
DNA (1878bp) protein (626aa)
Probable potassium transport system protein kup 4 n=2 Tax=Alphaproteobacteria RepID=KUP4_BRASB rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
potassium uptake protein Kup; K03549 KUP system potassium uptake protein rbh
04302015_21_scaffold_101_20
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16375..17556)
DNA (1182bp) protein (394aa)
Carbohydrate-selective porin OprB n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYX1_ACICJ rbh
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:KDM65367.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
carbohydrate-selective porin OprB; K07267 porin rbh
04302015_21_scaffold_101_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17945..19060)
DNA (1116bp) protein (372aa)
Putative transmembrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK54_OLICO rbh
putative transmembrane protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:AEI08306.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
04302015_21_scaffold_101_22
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19066..20031)
DNA (966bp) protein (322aa)
Cation diffusion facilitator family transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YM84_9PROT
Cation efflux protein {ECO:0000313|EMBL:GAN81587.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
04302015_21_scaffold_101_23
Gluconobacter thailandicus, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20037..20684)
DNA (648bp) protein (216aa)
Cation efflux system protein n=2 Tax=Gluconobacter thailandicus RepID=M9MA76_GLUTH
Cation efflux system protein {ECO:0000313|EMBL:GAC88377.1}; TaxID=1291534 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter thailandicus NBRC 3255.;"
cation efflux protein
04302015_21_scaffold_101_24
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20751..21158
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000376F583
Transcriptional regulator MerR {ECO:0000313|EMBL:GAN81589.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
MerR family transcriptional regulator
04302015_21_scaffold_101_25
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21629..22894)
DNA (1266bp) protein (422aa)
Major facilitator transporter n=1 Tax=Acidiphilium sp. PM RepID=F7SC24_9PROT
Major facilitator transporter {ECO:0000313|EMBL:EGO93311.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
major facilitator transporter
04302015_21_scaffold_101_26
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22891..23574)
DNA (684bp) protein (228aa)
ArsR family transcriptional regulator n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000360EFC7 rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator rbh
04302015_21_scaffold_101_27
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23647..24387
DNA (741bp) protein (247aa)
Beta-lactamase domain protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTY8_ACICJ
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABQ29070.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_101_28
unknown

Not on your lists

24359..24625
DNA (267bp) protein (89aa)

This feature has no annotations

04302015_21_scaffold_101_29
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24638..25948
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI000374FCDD rbh
Transposase {ECO:0000313|EMBL:GAN52658.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
transposase of ISMdi6, IS1182 family rbh
04302015_21_scaffold_101_30
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26274..27008)
DNA (735bp) protein (245aa)
ABC transporter related n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTI5_ACICJ rbh
ABC transporter related; K02003 putative ABC transport system ATP-binding protein rbh
ABC transporter related {ECO:0000313|EMBL:ABQ28917.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Displaying items 1-30 of 34 in total

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