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04302015_21_scaffold_210

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_210_1
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67..657)
DNA (591bp) protein (197aa)
Integrase, catalytic region n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTU0_ACICJ rbh
integrase catalytic subunit rbh
Integrase, catalytic region {ECO:0000313|EMBL:ABQ29022.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_210_2
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(702..977)
DNA (276bp) protein (92aa)
Transposase IS3/IS911 family protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTT9_ACICJ
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABQ29021.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_210_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1215..4376)
DNA (3162bp) protein (1054aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
exodeoxyribonuclease V subunit beta (EC:3.1.11.5) rbh
Exodeoxyribonuclease V subunit beta n=1 Tax=Nitratireductor indicus C115 RepID=K2PMC0_9RHIZ rbh
04302015_21_scaffold_210_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4379..6925)
DNA (2547bp) protein (849aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N4C7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF42228.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein rbh
04302015_21_scaffold_210_5
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7166..7339
DNA (174bp) protein (58aa)
Transposase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J4I7_9SPHN
Transposase {ECO:0000313|EMBL:EQB16854.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
transposase IS3/IS911 family protein
04302015_21_scaffold_210_6
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7358..8374
DNA (1017bp) protein (339aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FT14_ACICJ rbh
transposase IS116/IS110/IS902 family protein rbh
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ABQ28746.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_210_7
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8579..8737)
DNA (159bp) protein (53aa)
Transposase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J4I7_9SPHN
Transposase {ECO:0000313|EMBL:EQB16854.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
transposase IS3/IS911 family protein
04302015_21_scaffold_210_8
unknown

Not on your lists

8912..9103
DNA (192bp) protein (64aa)

This feature has no annotations

04302015_21_scaffold_210_9
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9137..9814
DNA (678bp) protein (226aa)
Res n=1 Tax=Acidiphilium sp. PM RepID=F7SBX2_9PROT
Res {ECO:0000313|EMBL:EGO93351.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
recombinase
04302015_21_scaffold_210_10
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(9880..12120)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B1Q7_TURPD
protein of unknown function DUF262
Uncharacterized protein {ECO:0000313|EMBL:AFM11214.1}; Flags: Precursor;; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H); (Leptospira parva).;"
04302015_21_scaffold_210_11
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12170..13183)
DNA (1014bp) protein (338aa)
Transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z0T3_9PROT
Transcriptional regulator {ECO:0000313|EMBL:EME67890.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
transcriptional regulator
04302015_21_scaffold_210_12
Gluconacetobacter sp. SXCC-1, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13185..15320)
DNA (2136bp) protein (712aa)
Spastin n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S645_9PROT rbh
Spastin {ECO:0000313|EMBL:EGG78123.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter sp. SXCC-1.;"
ATPase AAA rbh
04302015_21_scaffold_210_13
unknown

Not on your lists

comp(15320..15634)
DNA (315bp) protein (105aa)

This feature has no annotations

04302015_21_scaffold_210_14

Not on your lists

comp(16276..17898)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PKG3_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBH95414.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Tn5468, orf5
04302015_21_scaffold_210_15
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17895..19634)
DNA (1740bp) protein (580aa)
Tn5468, transposition protein D n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFF8_GALCS rbh
Tn5468, transposition protein D rbh
Tn5468, transposition protein D {ECO:0000313|EMBL:ADL55255.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
04302015_21_scaffold_210_16
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19637..21256)
DNA (1620bp) protein (540aa)
Tn5468, transposition protein C n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFF9_GALCS rbh
Tn5468, transposition protein C rbh
Tn5468, transposition protein C {ECO:0000313|EMBL:ADL55256.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
04302015_21_scaffold_210_17
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21243..23450)
DNA (2208bp) protein (736aa)
Integrase catalytic region n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFG0_GALCS rbh
integrase catalytic subunit rbh
Integrase catalytic region {ECO:0000313|EMBL:ADL55257.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
04302015_21_scaffold_210_18
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23447..24286)
DNA (840bp) protein (280aa)
TnsA endonuclease n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFG1_GALCS rbh
TnsA endonuclease rbh
TnsA endonuclease {ECO:0000313|EMBL:ADL55258.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
04302015_21_scaffold_210_19
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25032..25448
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0H4V3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP82489.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
Displaying 19 items

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