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04302015_21_scaffold_213

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_213_1
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1355)
DNA (1353bp) protein (451aa)
Conjugal transfer protein n=1 Tax=Gluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693) RepID=G2I8L7_GLUXN
Aldehyde dehydrogenase/conjugal transfer protein {ECO:0000313|EMBL:GAN82291.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
conjugal transfer protein
04302015_21_scaffold_213_2
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1356..1763)
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN80593.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_213_3
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1816..2040)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN82293.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_213_4
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2116..3954)
DNA (1839bp) protein (613aa)
Conjugal transfer protein TraG n=3 Tax=Acetobacteraceae RepID=G2I8I5_GLUXN rbh
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:GAN82294.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
traG; conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 rbh
04302015_21_scaffold_213_5
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3958..4998)
DNA (1041bp) protein (347aa)
Type II secretion system protein E n=1 Tax=Acidiphilium sp. PM RepID=F7SC42_9PROT rbh
Secretion system type IV VirB11 {ECO:0000313|EMBL:GAN82295.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
virB11; type IV secretion system VirB11; K03196 type IV secretion system protein VirB11 rbh
04302015_21_scaffold_213_6
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4988..6157)
DNA (1170bp) protein (390aa)
VirB10 n=1 Tax=Rhizobium etli RepID=Q9RP09_RHIET
Secretion system type IV protein VirB10 {ECO:0000313|EMBL:GAN82296.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
virB10a; type IV secretion system protein VirB10; K03195 type IV secretion system protein VirB10
04302015_21_scaffold_213_7
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6154..7080)
DNA (927bp) protein (309aa)
P-type conjugative transfer protein VirB9 n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K410_AGRVS
Secretion system type IV protein VirB9/conjugal transfer protein {ECO:0000313|EMBL:GAN82297.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
virB9; type IV secretion system protein VirB9; K03204 type IV secretion system protein VirB9
04302015_21_scaffold_213_8
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7077..7769)
DNA (693bp) protein (231aa)
conjugal transfer protein TraJ n=1 Tax=Acetobacter aceti RepID=UPI0002260329
Secretion system type IV VirB8 {ECO:0000313|EMBL:GAN82298.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
transport secretion system IV VirB8 protein; K03203 type IV secretion system protein VirB8
04302015_21_scaffold_213_9
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7776..8069)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7S3_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ83140.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_213_10
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8066..8983)
DNA (918bp) protein (306aa)
Transport secretion system IV VirB6 protein n=3 Tax=Acetobacteraceae RepID=G2I8I0_GLUXN
Secretion system type IV protein VirB6 {ECO:0000313|EMBL:GAN80600.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
transport secretion system IV VirB6 protein; K03201 type IV secretion system protein VirB6
04302015_21_scaffold_213_11
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8992..9342)
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN80601.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_213_12
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9342..10064)
DNA (723bp) protein (241aa)
Type IV secretion system VirB5 n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7S6_ACIMA
Secretion system type IV VirB5 {ECO:0000313|EMBL:GAN82301.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
virB5; type IV secretion system VirB5; K03200 type IV secretion system protein VirB5
04302015_21_scaffold_213_13
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10077..12467)
DNA (2391bp) protein (797aa)
Transport secretion system IV, VirB4 protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K2D4_RHIEC rbh
Secretion system type IV protein VirB4 {ECO:0000313|EMBL:GAN82302.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
virB4a; type IV secretion system protein VirB4; K03199 type IV secretion system protein VirB4 rbh
04302015_21_scaffold_213_14
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12454..12789)
DNA (336bp) protein (112aa)
Type IV secretory pathway VirB3 family protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UMA6_SINMW
Secretion system type IV VirB3 {ECO:0000313|EMBL:GAN82303.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
type IV secretion system protein VirB3; K03198 type IV secretion system protein VirB3
04302015_21_scaffold_213_15
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12791..13153)
DNA (363bp) protein (121aa)
VirB2 n=1 Tax=Rhizobium radiobacter RepID=O66282_RHIRD
Secretion system type IV pilin subunit VirB2 {ECO:0000313|EMBL:GAN82304.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
virB2; type IV secretion system pilin subunit VirB2; K03197 type IV secretion system protein VirB2
04302015_21_scaffold_213_16
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13150..13902)
DNA (753bp) protein (251aa)
Lytic transglycosylase, catalytic n=1 Tax=Acidiphilium sp. PM RepID=F7SC94_9PROT
Secretion system type IV VirB1/lytic transglycosylase {ECO:0000313|EMBL:GAN82305.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
transport secretion system IV VirB1 protein
04302015_21_scaffold_213_17
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13903..14517)
DNA (615bp) protein (205aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
RaiI n=1 Tax=Rhizobium etli RepID=B8YCQ8_RHIET
raiI; autoinducer synthesis protein
04302015_21_scaffold_213_18
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14837..15574)
DNA (738bp) protein (246aa)
LuxR family transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZEL3_9PROT
Transcriptional regulator LuxR {ECO:0000313|EMBL:GAN82307.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
LuxR family transcriptional regulator
04302015_21_scaffold_213_19
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16046..16543
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XPD6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM98544.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_21_scaffold_213_20
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16580..17455
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZEM7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM98070.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_21_scaffold_213_21
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17443..18147
DNA (705bp) protein (235aa)
Uncharacterized protein (Fragment) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YGR9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM98071.1}; Flags: Fragment;; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_21_scaffold_213_22
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18237..18797)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YT98_9PROT
Acetyltransferase {ECO:0000313|EMBL:GAN80612.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_21_scaffold_213_23
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18797..19090)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YGS5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN80613.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_21_scaffold_213_24
unknown

Not on your lists

comp(19181..19411)
DNA (231bp) protein (77aa)

This feature has no annotations

04302015_21_scaffold_213_25
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19436..19837
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035C7A69
Uncharacterized protein {ECO:0000313|EMBL:GAN80614.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_21_scaffold_213_26
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19848..22187)
DNA (2340bp) protein (780aa)
copA; cation transport ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Copper-exporting ATPase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQS8_9PROT
Heavy metal transporter ATPase {ECO:0000313|EMBL:GAN80615.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_213_27
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22249..22569
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000382A8D8
Uncharacterized protein {ECO:0000313|EMBL:GAN80616.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_21_scaffold_213_28
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22566..22958
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN80617.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_213_29
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23037..24395
DNA (1359bp) protein (453aa)
Putative multicopper oxidase (Laccase-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7B9_AZOL4
Multicopper oxidase {ECO:0000313|EMBL:GAN80618.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
multicopper oxidase
04302015_21_scaffold_213_30
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24439..24840
DNA (402bp) protein (134aa)
Membrane protein-like protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YUH2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN80619.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
Displaying items 1-30 of 59 in total

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