ggKbase home page

04302015_21_scaffold_216

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_216_1
unknown

Not on your lists

2..259
DNA (258bp) protein (86aa)

This feature has no annotations

04302015_21_scaffold_216_2
unknown

Not on your lists

256..489
DNA (234bp) protein (78aa)

This feature has no annotations

04302015_21_scaffold_216_3
unknown

Not on your lists

486..1187
DNA (702bp) protein (234aa)

This feature has no annotations

04302015_21_scaffold_216_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1177..2139
DNA (963bp) protein (321aa)
Uncharacterized protein {ECO:0000313|EMBL:AJA07460.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
04302015_21_scaffold_216_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2132..3214
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00037AC738
Gp37Gp68 family protein {ECO:0000313|EMBL:AHG92092.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phage Gp37Gp68
04302015_21_scaffold_216_6
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3242..3604
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QJ12_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EGF93075.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
04302015_21_scaffold_216_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3601..3948
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTA6_SIDLE
Uncharacterized protein {ECO:0000313|EMBL:ETR75057.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
04302015_21_scaffold_216_8
Mycobacterium phage Sbash, Caudovirales, Viruses

Not on your lists

3941..4240
DNA (300bp) protein (100aa)
Gp80 n=1 Tax=Mycobacterium phage Mozy RepID=G1D4J4_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AJA43374.1}; TaxID=1567475 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Mycobacterium phage Sbash.;"
hypothetical protein
04302015_21_scaffold_216_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4447..5451
DNA (1005bp) protein (335aa)
integrase n=2 Tax=Gluconacetobacter RepID=UPI000237E393
putative Integrase
Putative Integrase {ECO:0000313|EMBL:CCD02956.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
04302015_21_scaffold_216_10
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5471..6043
DNA (573bp) protein (191aa)
Putative endonuclease n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LI06_RHITR
Putative nuclease {ECO:0000313|EMBL:GAJ96052.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
putative endonuclease
04302015_21_scaffold_216_11
unknown

Not on your lists

6045..6290
DNA (246bp) protein (82aa)

This feature has no annotations

04302015_21_scaffold_216_12

Not on your lists

comp(7106..7381)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN32516.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
04302015_21_scaffold_216_13
unknown

Not on your lists

comp(7484..8140)
DNA (657bp) protein (219aa)

This feature has no annotations

04302015_21_scaffold_216_14
unknown

Not on your lists

comp(8231..8833)
DNA (603bp) protein (201aa)

This feature has no annotations

04302015_21_scaffold_216_15
unknown

Not on your lists

comp(8839..9186)
DNA (348bp) protein (116aa)

This feature has no annotations

04302015_21_scaffold_216_16
unknown

Not on your lists

comp(9227..9802)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Pseudomonas fragi RepID=UPI0002E13D79
04302015_21_scaffold_216_17
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9848..10450)
DNA (603bp) protein (201aa)
Pesticin domain protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RE17_9PSED
Pesticin domain-containing protein {ECO:0000313|EMBL:BAQ78671.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
pesticin domain protein
04302015_21_scaffold_216_18
unknown

Not on your lists

comp(10440..10625)
DNA (186bp) protein (62aa)

This feature has no annotations

04302015_21_scaffold_216_19
unknown

Not on your lists

comp(10764..11096)
DNA (333bp) protein (111aa)

This feature has no annotations

04302015_21_scaffold_216_20
unknown

Not on your lists

comp(11098..11517)
DNA (420bp) protein (140aa)

This feature has no annotations

04302015_21_scaffold_216_21
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11517..15542)
DNA (4026bp) protein (1342aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YF26_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR01487.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
04302015_21_scaffold_216_22
unknown

Not on your lists

comp(15539..15967)
DNA (429bp) protein (143aa)

This feature has no annotations

04302015_21_scaffold_216_23
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15978..16997)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0E1X9_RALPI
Uncharacterized protein {ECO:0000313|EMBL:ENZ79638.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;"
hypothetical protein
04302015_21_scaffold_216_24
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17004..17603)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JCZ2_BURP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC71048.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
04302015_21_scaffold_216_25
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17600..18721)
DNA (1122bp) protein (374aa)
Baseplate J-like family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QG85_9CAUL
Baseplate J-like family protein {ECO:0000313|EMBL:EGF92413.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
baseplate J family protein
04302015_21_scaffold_216_26

Not on your lists

comp(18725..20701)
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6L913_9RHOB
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48251.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
04302015_21_scaffold_216_27
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20698..21252)
DNA (555bp) protein (185aa)
GP46 family protein n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VU86_DESAO
GP46 family protein
GP46 family protein {ECO:0000313|EMBL:ADU63393.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
04302015_21_scaffold_216_28
unknown

Not on your lists

comp(21252..21776)
DNA (525bp) protein (175aa)

This feature has no annotations

04302015_21_scaffold_216_29
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21773..22933)
DNA (1161bp) protein (387aa)
Bacteriophage Mu P n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YW25_DESAF
bacteriophage Mu P
Bacteriophage Mu P {ECO:0000313|EMBL:EGJ49055.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
04302015_21_scaffold_216_30
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22930..24228)
DNA (1299bp) protein (433aa)
bacteriophage DNA circulation protein, Mu-like
DNA circulation-like protein id=3205410 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Putative bacteriophage DNA circulation protein, Mu-like protein {ECO:0000313|EMBL:ABE29928.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
Displaying items 1-30 of 40 in total

View Taxonomy