ggKbase home page

04302015_21_scaffold_218

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_218_1
bacterium YEK0313, Bacteria

Not on your lists

1..318
DNA (318bp) protein (106aa)
Conjugal transfer protein traD n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E979_BRASB
conjugal transfer protein traD
Conjugal transfer protein TraD {ECO:0000313|EMBL:CEJ12902.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
04302015_21_scaffold_218_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(315..1175)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LJ4_RHOP5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ07190.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
04302015_21_scaffold_218_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1172..1999)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LJ5_RHOP5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ07189.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
04302015_21_scaffold_218_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2234..7468)
DNA (5235bp) protein (1745aa)
Transcription elongation factor GreA/GreB domain protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2X7_DEHLB rbh
transcription elongation factor GreA/GreB domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
04302015_21_scaffold_218_5
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8384..9640
DNA (1257bp) protein (419aa)
integrase n=1 Tax=Xanthobacteraceae RepID=UPI000382AB3F rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:ACB81265.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
04302015_21_scaffold_218_6

Not on your lists

comp(9630..9902)
DNA (273bp) protein (91aa)
phage transcriptional regulator AlpA id=12498574 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:CBH97702.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
prophage CP4-57 regulator; K07733 prophage regulatory protein
04302015_21_scaffold_218_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10117..11124
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXZ4_9PROT
COGs COG2378 {ECO:0000313|EMBL:CDP52012.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
04302015_21_scaffold_218_8
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11111..13861
DNA (2751bp) protein (917aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MQD9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AET95554.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
hypothetical protein
04302015_21_scaffold_218_9
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13861..14850
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MQE0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET95555.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
04302015_21_scaffold_218_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14861..16282
DNA (1422bp) protein (474aa)
Conserved domain protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3W8_POLGS
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ADZ68950.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Displaying 10 items

View Taxonomy