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04302015_21_scaffold_252

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_252_1
unknown

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617..916
DNA (300bp) protein (100aa)

This feature has no annotations

04302015_21_scaffold_252_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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937..1395
DNA (459bp) protein (153aa)
CheW protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKD9_9PROT
CheW protein; K03408 purine-binding chemotaxis protein CheW
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
04302015_21_scaffold_252_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1403..2836
DNA (1434bp) protein (478aa)
CheR-type MCP methyltransferase (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] rbh
Chemotaxis protein methyltransferase CheR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJU2_9PROT rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
04302015_21_scaffold_252_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2847..3485
DNA (639bp) protein (213aa)
CheW protein id=2161112 bin=GWE2_Gallionellales_58_10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
CheW protein; K03408 purine-binding chemotaxis protein CheW
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
04302015_21_scaffold_252_5
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3647..5110
DNA (1464bp) protein (488aa)
Type IV pilus biogenesis protein PilJ n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUH3_9PROT rbh
methyl-accepting chemotaxis sensory transducer
Tax=RBG_16_Gallionellales_57_15_curated
04302015_21_scaffold_252_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5174..7489
DNA (2316bp) protein (772aa)
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] rbh
Signal transduction histidine kinase CheA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJR3_9PROT rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
04302015_21_scaffold_252_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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7507..8601
DNA (1095bp) protein (365aa)
response regulator receiver (CheY-like) modulated CheB methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] rbh
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=CHEB_NITMU rbh
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
04302015_21_scaffold_252_8
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8617..11547
DNA (2931bp) protein (977aa)
sensory transduction histidine kinase (EC:2.7.3.-); K07677 two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] rbh
Putative sensory transduction histidine kinase of highly complex domain structure {ECO:0000313|EMBL:CAI09580.1}; EC=2.7.3.- {ECO:0000313|EMBL:CAI09580.1};; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036469FC rbh
04302015_21_scaffold_252_9
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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11569..12762
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036802EA rbh
Histidine kinase {ECO:0000313|EMBL:AKH19190.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
response regulator rbh
04302015_21_scaffold_252_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12773..13936
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036A3834 rbh
response regulator receiver protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_21_scaffold_252_11

Not on your lists

comp(14249..14938)
DNA (690bp) protein (230aa)
General secretion pathway protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AC00_9ZZZZ
General secretion pathway protein {ECO:0000313|EMBL:EQD39395.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AAA ATPase
Displaying 11 items

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