ggKbase home page

04302015_21_scaffold_308

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_308_1
Synechococcus sp. RCC307, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3..926)
DNA (924bp) protein (308aa)
Predicted permease n=1 Tax=Synechococcus sp. (strain RCC307) RepID=A5GW28_SYNR3
permease; K07089
Predicted permease {ECO:0000313|EMBL:CAK29087.1}; TaxID=316278 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain RCC307).;"
04302015_21_scaffold_308_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1074..1361)
DNA (288bp) protein (96aa)
UPI0003C7EEEE related cluster n=1 Tax=unknown RepID=UPI0003C7EEEE
Regulated in copper repressor {ECO:0000313|EMBL:ETK35399.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
04302015_21_scaffold_308_3
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1584..2315
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002EFA648
AhpC/TSA family protein {ECO:0000313|EMBL:KJF16685.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
04302015_21_scaffold_308_4
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2312..3040
DNA (729bp) protein (243aa)
Cytochrome c biogenesis protein n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8G970_9PSEU
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EHY87455.1}; Flags: Precursor;; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
cytochrome c-type biogenesis protein CcdA; thiol-disulfide oxido-reductase
04302015_21_scaffold_308_5
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3054..3710
DNA (657bp) protein (219aa)
Redoxin domain protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M0W8_ACIFD
Redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ACU54626.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
04302015_21_scaffold_308_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3897..5003)
DNA (1107bp) protein (369aa)
NLP/P60 protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTI4_ACIC1
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ABK52744.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
04302015_21_scaffold_308_7
unknown

Not on your lists

comp(5368..5541)
DNA (174bp) protein (58aa)

This feature has no annotations

04302015_21_scaffold_308_8
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5607..5894)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S8J1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFQ84496.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
hypothetical protein
04302015_21_scaffold_308_9
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(5944..6492)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2G7C6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJF16070.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
04302015_21_scaffold_308_10
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6492..6743)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Rhodococcus sp. DK17 RepID=UPI000364BF3B
Uncharacterized protein {ECO:0000313|EMBL:CCH75134.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
hypothetical protein; K08982 putative membrane protein
04302015_21_scaffold_308_11
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6979..7683
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B62492
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP81045.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
04302015_21_scaffold_308_12
unknown

Not on your lists

comp(8099..8617)
DNA (519bp) protein (173aa)

This feature has no annotations

04302015_21_scaffold_308_13
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8726..10105)
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LG51_9ACTO
integral membrane sensor signal transduction histidine kinase
04302015_21_scaffold_308_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10098..10811)
DNA (714bp) protein (238aa)
transcriptional regulator n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI0003773542
winged helix family two component transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
04302015_21_scaffold_308_15
unknown

Not on your lists

comp(10863..11081)
DNA (219bp) protein (73aa)

This feature has no annotations

04302015_21_scaffold_308_16
unknown

Not on your lists

11250..11600
DNA (351bp) protein (117aa)

This feature has no annotations

04302015_21_scaffold_308_17
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11611..11991
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SD02_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:KJF18936.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
04302015_21_scaffold_308_18
unknown

Not on your lists

comp(12030..12212)
DNA (183bp) protein (61aa)

This feature has no annotations

04302015_21_scaffold_308_19
unknown

Not on your lists

12724..12882
DNA (159bp) protein (53aa)

This feature has no annotations

04302015_21_scaffold_308_20
unknown

Not on your lists

12956..13273
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying 20 items

View Taxonomy