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04302015_21_scaffold_316

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_316_1
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..869
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034C4620
Beta-lactamase {ECO:0000313|EMBL:KIE39937.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
hypothetical protein
04302015_21_scaffold_316_2
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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1057..1794
DNA (738bp) protein (246aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit II n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M190_ACIFD
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:ACU54738.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
04302015_21_scaffold_316_3
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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1794..3506
DNA (1713bp) protein (571aa)
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:KJE77601.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KJE77601.1};; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] rbh
Cytochrome c oxidase, subunit I n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M189_ACIFD rbh
04302015_21_scaffold_316_4
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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3503..3895
DNA (393bp) protein (131aa)
Cytochrome c oxidase polypeptide 4 {ECO:0000313|EMBL:KJF18020.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KJF18020.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M188_ACIFD
hypothetical protein
04302015_21_scaffold_316_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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4602..5417
DNA (816bp) protein (272aa)
Integral membrane protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q0Q5_CATAD rbh
integral membrane protein rbh
Integral membrane protein {ECO:0000313|EMBL:ACU69683.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
04302015_21_scaffold_316_6
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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5428..7245
DNA (1818bp) protein (606aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:ABK53637.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABK53637.1};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Succinate dehydrogenase subunit A n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LW27_ACIC1 rbh
04302015_21_scaffold_316_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7245..8024
DNA (780bp) protein (260aa)
fumarate reductase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase subunit B id=4737577 bin=GWC2_Methylomirabilis_70_24 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
Tax=GWA2_Rokubacteria_70_23_curated
04302015_21_scaffold_316_8
unknown

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8025..8390
DNA (366bp) protein (122aa)

This feature has no annotations

04302015_21_scaffold_316_9
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(8392..11019)
DNA (2628bp) protein (876aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000369FEC0
multi-sensor hybrid histidine kinase rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACL45900.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
04302015_21_scaffold_316_10
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11143..12936)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CDR6_CAPO3
baaA1; trimeric autotransporter adhesin
Putative trimeric autotransporter adhesin {ECO:0000313|EMBL:CBY80800.1}; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
Displaying 10 items

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