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04302015_21_scaffold_320

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_320_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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32..1432
DNA (1401bp) protein (467aa)
Transposase, IS605 OrfB family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X4E0_THIK1
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ADG29741.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_21_scaffold_320_2
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1386..2153)
DNA (768bp) protein (256aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A9Y5_ALKEH
04302015_21_scaffold_320_3
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2157..2846)
DNA (690bp) protein (230aa)
respiratory nitrate reductase subunit gamma; K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4]
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000371D6AB rbh
Respiratory nitrate reductase gamma chain {ECO:0000313|EMBL:KEZ76580.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
04302015_21_scaffold_320_4
Yokenella regensburgei, Yokenella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2846..3565)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003824F7F
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:EHM45739.1}; TaxID=1002368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yokenella.;" source="Yokenella regensburgei ATCC 43003.;"
nitrate reductase molybdenum cofactor assembly chaperone; K00373 nitrate reductase 1, delta subunit
04302015_21_scaffold_320_5
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3574..5136)
DNA (1563bp) protein (521aa)
respiratory nitrate reductase subunit beta; K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4] rbh
nitrate reductase A subunit beta n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036B1EB1 rbh
Nitrate reductase A subunit beta {ECO:0000313|EMBL:KEZ76582.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
04302015_21_scaffold_320_6
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5133..8885)
DNA (3753bp) protein (1251aa)
respiratory nitrate reductase alpha subunit apoprotein (EC:1.97.1.9); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4] rbh
nitrate reductase A subunit alpha n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036A31A6 rbh
Respiratory nitrate reductase alpha subunit apoprotein {ECO:0000313|EMBL:ABI56356.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
04302015_21_scaffold_320_7
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8882..9964)
DNA (1083bp) protein (361aa)
C4-dicarboxylate transporter n=1 Tax=Thauera phenylacetica B4P RepID=N6YXS9_9RHOO
C4-dicarboxylate transporter {ECO:0000313|EMBL:ENO96375.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
C4-dicarboxylate transporter
04302015_21_scaffold_320_8

Not on your lists

10695..10970
DNA (276bp) protein (92aa)
Prevent-host-death family protein n=1 Tax=mine drainage metagenome RepID=T0ZTP3_9ZZZZ
Prevent-host-death family protein {ECO:0000313|EMBL:EQD48063.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
toxin-antitoxin (TA) system antitoxin
04302015_21_scaffold_320_9
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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10972..11391
DNA (420bp) protein (140aa)
PIN domain protein id=2069369 bin=GWE2_Gallionellales_58_10 species=unknown genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
PilT domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
04302015_21_scaffold_320_10
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11445..12524
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370B854 rbh
Predicted transcriptional regulator {ECO:0000313|EMBL:BAO81056.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
hypothetical protein rbh
Displaying 10 items

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