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04302015_21_scaffold_389

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_389_1
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

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439..1578
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2L0_THIK1
hypothetical protein
Tax=CG_Mariprof_03
04302015_21_scaffold_389_2
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

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1669..3063
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQA3_POLNA
hypothetical protein
Tax=CG_Mariprof_03
04302015_21_scaffold_389_3
unknown

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3117..3230
DNA (114bp) protein (38aa)

This feature has no annotations

04302015_21_scaffold_389_4
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

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3223..4422
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QPD5_9ZZZZ rbh
hypothetical protein rbh
Tax=CG_Mariprof_03
04302015_21_scaffold_389_5
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4534..6360
DNA (1827bp) protein (609aa)
Putative Ti-type conjugative transfer system, TraG n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUK0_THIA3 rbh
Putative Ti-type conjugative transfer system, TraG rbh
Tax=CG_Mariprof_03
04302015_21_scaffold_389_6
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6366..6896
DNA (531bp) protein (177aa)
Putative Type IV secretory pathway, protease TraF n=1 Tax=mine drainage metagenome RepID=E6QPE1_9ZZZZ
putative Type IV secretory pathway, protease TraF
Tax=CG_Mariprof_03
04302015_21_scaffold_389_7
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7507..7806)
DNA (300bp) protein (100aa)
Fis family transcriptional regulator n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXI6_9GAMM
Fis family transcriptional regulator {ECO:0000313|EMBL:EGW23395.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
04302015_21_scaffold_389_8
unknown

Not on your lists

comp(7803..7904)
DNA (102bp) protein (34aa)

This feature has no annotations

04302015_21_scaffold_389_9

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comp(8174..9067)
DNA (894bp) protein (298aa)
Transposase of ISCARN11, IS1595 family ISSod11 group n=1 Tax=mine drainage metagenome RepID=E6QCD5_9ZZZZ rbh
Transposase of ISCARN11, IS1595 family ISSod11 group {ECO:0000313|EMBL:CBI04861.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase of ISAar1, IS1595 family, ISSod11 group
04302015_21_scaffold_389_10

Not on your lists

comp(9364..9831)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=uncultured bacterium HHV35 RepID=B5TTR0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKM27449.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
04302015_21_scaffold_389_11
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9876..10301)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EB18_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD94002.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
04302015_21_scaffold_389_12
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10995..11795)
DNA (801bp) protein (267aa)
Transcriptional regulator metE/metH family n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SVZ2_JANMA rbh
Bacterial regulatory helix-turn-helix, lysR family protein {ECO:0000313|EMBL:AJZ62713.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
MetE/MetH family transcriptional regulator; K03576 LysR family transcriptional regulator, regulator for metE and metH rbh
Displaying 12 items

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