ggKbase home page

04302015_21_scaffold_427

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_427_1

Not on your lists

2..1381
DNA (1380bp) protein (460aa)
Integral membrane protein MviN n=1 Tax=mine drainage metagenome RepID=T0YZI1_9ZZZZ rbh
Integral membrane protein MviN {ECO:0000313|EMBL:EQD37362.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
integral membrane protein MviN; K03980 virulence factor
04302015_21_scaffold_427_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1404..2339)
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9X3_NITMU
transcriptional regulator CysB-like protein; K13634 LysR family transcriptional regulator, cys regulon transcriptional activator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABB74448.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
04302015_21_scaffold_427_3
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2449..3222
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3IFQ1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIK46886.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
sulfite exporter TauE/SafE; K07090
04302015_21_scaffold_427_4
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3351..4502
DNA (1152bp) protein (384aa)
ATPase (AAA+ superfamily)-like protein n=1 Tax=Thauera sp. 28 RepID=N6ZIC4_9RHOO rbh
ATPase (AAA+ superfamily)-like protein; K07133 rbh
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
04302015_21_scaffold_427_5
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4759..5997
DNA (1239bp) protein (413aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P6P8_AROAE rbh
ATPase {ECO:0000313|EMBL:CDM22483.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
ATPase; K07133 rbh
04302015_21_scaffold_427_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6104..7102
DNA (999bp) protein (333aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Riboflavin biosynthesis protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PYZ0_9RHOO
ribF; riboflavin biosynthesis protein
04302015_21_scaffold_427_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7099..9933
DNA (2835bp) protein (945aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
isoleucyl-tRNA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D364D rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_21_scaffold_427_8

Not on your lists

9926..10396
DNA (471bp) protein (157aa)
Peptidase A8, signal peptidase II {ECO:0000313|EMBL:EQD34514.1}; EC=3.4.23.36 {ECO:0000313|EMBL:EQD34514.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
lspA; lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36]
Peptidase A8, signal peptidase II n=1 Tax=mine drainage metagenome RepID=T1A0A2_9ZZZZ
04302015_21_scaffold_427_9
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10371..11042
DNA (672bp) protein (224aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QJ74_METS6 rbh
oxidoreductase molybdopterin-binding protein; K07147 rbh
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:ACT49771.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
04302015_21_scaffold_427_10

Not on your lists

11105..11602
DNA (498bp) protein (166aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=mine drainage metagenome RepID=T0ZX76_9ZZZZ
Hydroxymethylbutenyl pyrophosphate reductase {ECO:0000313|EMBL:EQD34515.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 10 items

View Taxonomy