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04302015_21_scaffold_580

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_580_1
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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2..916
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00037A50FB
Uncharacterized protein {ECO:0000313|EMBL:KJF17780.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
04302015_21_scaffold_580_2
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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932..2281
DNA (1350bp) protein (450aa)
Phosphomannomutase/phosphoglucomutase {ECO:0000313|EMBL:KJF17779.1}; EC=5.4.2.2 {ECO:0000313|EMBL:KJF17779.1};; EC=5.4.2.8 {ECO:0000313|EMBL:KJF17779.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8]
Phosphomannomutase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVJ2_9ACTN
04302015_21_scaffold_580_3
Corynebacterium matruchotii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2281..2508
DNA (228bp) protein (76aa)
UPF0434 protein HMPREF0299_5194 n=1 Tax=Corynebacterium matruchotii ATCC 14266 RepID=E0DHP0_9CORY
UPF0434 protein CORMATOL_02633 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=566549 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium matruchotii ATCC 33806.;"
04302015_21_scaffold_580_4
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2505..3707)
DNA (1203bp) protein (401aa)
Cytochrome P450 n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A1D4_9ACTN
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:BAN02557.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
04302015_21_scaffold_580_5

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comp(3709..4917)
DNA (1209bp) protein (403aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Frankia sp. CN3 RepID=G6H9T0_9ACTO
Thiolase {ECO:0000313|EMBL:KGA18453.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
04302015_21_scaffold_580_6

Not on your lists

comp(4989..5492)
DNA (504bp) protein (168aa)
Riboflavin synthase {ECO:0000313|EMBL:EQD48920.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EQD48920.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Riboflavin synthase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B3I6_9ZZZZ
riboflavin synthase
04302015_21_scaffold_580_7
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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5589..6893
DNA (1305bp) protein (435aa)
(R)-benzylsuccinyl-CoA dehydrogenase {ECO:0000313|EMBL:KJE78162.1}; EC=1.3.8.3 {ECO:0000313|EMBL:KJE78162.1};; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
putative acyl-CoA dehydrogenase (EC:1.3.99.-) rbh
Butyryl-CoA dehydrogenase n=1 Tax=Patulibacter medicamentivorans RepID=H0E9W6_9ACTN rbh
04302015_21_scaffold_580_8
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6890..7843)
DNA (954bp) protein (318aa)
Luciferase family protein n=3 Tax=Amycolatopsis mediterranei RepID=D8HY41_AMYMU
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:AEK41221.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
04302015_21_scaffold_580_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7871..8650)
DNA (780bp) protein (260aa)
UDP-galactose-lipid carrier transferase {ECO:0000313|EMBL:EHN10499.1}; EC=2.-.-.- {ECO:0000313|EMBL:EHN10499.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI000369E013
hypothetical protein
04302015_21_scaffold_580_10
unknown

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8743..9144
DNA (402bp) protein (134aa)

This feature has no annotations

Displaying 10 items

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