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04302015_21_scaffold_3144

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_3144_1
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

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3..452
DNA (450bp) protein (150aa)
Uncharacterized protein id=1908305 bin=GWA2_OP3_52_12 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
04302015_21_scaffold_3144_2
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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comp(470..1003)
DNA (534bp) protein (178aa)
ATP-cobalamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] id=5227259 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
pduO; cobalamin adenosyltransferase PduO (EC:2.5.1.17)
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
04302015_21_scaffold_3144_3
unknown

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1101..1262
DNA (162bp) protein (54aa)

This feature has no annotations

04302015_21_scaffold_3144_4
unknown

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1278..1385
DNA (108bp) protein (36aa)

This feature has no annotations

04302015_21_scaffold_3144_trna_1
unknown

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comp(1749..1833)
DNA (85bp)
transferRNA
04302015_21_scaffold_3144_5
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

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comp(1845..2393)
DNA (549bp) protein (183aa)
50S ribosomal protein L19 n=1 Tax=sediment metagenome RepID=D9PKR1_9ZZZZ
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_17_curated
04302015_21_scaffold_3144_6
R_OD1_Kaiserbacteria_55_19, Kaiserbacteria, Parcubacteria, Bacteria

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comp(2421..3161)
DNA (741bp) protein (247aa)
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=5803270 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_19_curated
04302015_21_scaffold_3144_7
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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comp(3184..3537)
DNA (354bp) protein (118aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Isoprenyl transferase n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FVJ2_9FIRM
Tax=CG_Nomura_02
04302015_21_scaffold_3144_8
GWB1_OD1_57_6, Parcubacteria, Bacteria

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comp(3506..3796)
DNA (291bp) protein (97aa)
undecaprenyl pyrophosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Undecaprenyl pyrophosphate synthetase n=1 Tax=sediment metagenome RepID=D9PKQ8_9ZZZZ
Isoprenyl transferase {ECO:0000313|EMBL:KKW47025.1}; TaxID=1618889 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_57_6.;"
04302015_21_scaffold_3144_9
R_OD1_Kaiserbacteria_53_31, Kaiserbacteria, Parcubacteria, Bacteria

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comp(3809..4513)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z103_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_53_31_curated
Displaying 10 items

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