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04302015_21_scaffold_2318

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_2318_1
CG_Verruco_01, Verrucomicrobia, Bacteria

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2..166
DNA (165bp) protein (55aa)
Protein translocase subunit SecY n=1 Tax=uncultured marine bacterium MedDCM-OCT-S05-C114 RepID=D6PDF1_9BACT
Tax=CG_Verruco_01
04302015_21_scaffold_2318_2
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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222..995
DNA (774bp) protein (258aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase n=2 Tax=unclassified Opitutaceae RepID=H1IX15_9BACT
04302015_21_scaffold_2318_3
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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1070..1456
DNA (387bp) protein (129aa)
30S ribosomal protein S13 id=2746456 bin=GWF2_Verrucomicrobia_51_19 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Verrucomicrobia_51_19 organism_group=Verrucomicrobia organism_desc=Good +
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
04302015_21_scaffold_2318_4
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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1474..1980
DNA (507bp) protein (169aa)
30S ribosomal protein S11 n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EJT7_CORAD
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
04302015_21_scaffold_2318_5
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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2011..2619
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Coraliomargarita sp. CAG:312 RepID=R7LA32_9BACT rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262865 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
04302015_21_scaffold_2318_6
CG_Verruco_01, Verrucomicrobia, Bacteria

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2662..3663
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EJT5_CORAD rbh
Tax=CG_Verruco_01
04302015_21_scaffold_2318_7
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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3688..4140
DNA (453bp) protein (151aa)
50S ribosomal protein L17 n=1 Tax=Coraliomargarita sp. CAG:312 RepID=R7LA91_9BACT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262865 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
Displaying 7 items

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