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04302015_21_scaffold_10014

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_10014_1
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..224)
DNA (222bp) protein (74aa)
ABC-type transporter, integral membrane subunit id=1897032 bin=GWB2_Deltaproteobacteria_65_81 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
ABC-type branched-chain amino acid transport system, permease component; K01998 branched-chain amino acid transport system permease protein
Tax=CG_Delta_02
04302015_21_scaffold_10014_2
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(221..751)
DNA (531bp) protein (177aa)
Inner-membrane translocator id=3742676 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria rbh
inner-membrane translocator
Tax=CG_Delta_02
04302015_21_scaffold_10014_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(930..2042)
DNA (1113bp) protein (371aa)
ABC transporter substrate-binding protein id=1897034 bin=GWB2_Deltaproteobacteria_65_81 species=Burkholderia terrae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + rbh
extracellular ligand-binding receptor
Tax=GWA2_Deltaproteobacteria_65_63_curated
04302015_21_scaffold_10014_4
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2114..2692)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=2 Tax=Rhodospirillum rubrum RepID=G2TB06_RHORU
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
04302015_21_scaffold_10014_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2771..3160
DNA (390bp) protein (130aa)
Amine oxidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MM47_9BURK
Amine oxidase {ECO:0000313|EMBL:EIK90287.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative amine oxidase
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