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04302015_21_scaffold_49

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_49_1
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230..703)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003673934
Uncharacterized protein {ECO:0000313|EMBL:GAN78754.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_21_scaffold_49_2
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(730..987)
DNA (258bp) protein (86aa)
Glutaredoxin n=3 Tax=Acidiphilium RepID=F0IYM9_ACIMA
grxC; glutaredoxin; K03676 glutaredoxin 3
Glutaredoxin {ECO:0000313|EMBL:BAJ80889.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_49_3
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1074..1808)
DNA (735bp) protein (245aa)
Phosphoribosyltransferase n=1 Tax=Acidiphilium sp. PM RepID=F7S2Z3_9PROT
putative phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:EGO96434.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_49_4
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1851..2615
DNA (765bp) protein (255aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase {ECO:0000313|EMBL:BAJ80887.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAJ80887.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Methyltransferase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IYM7_ACIMA
04302015_21_scaffold_49_5
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2610..3362)
DNA (753bp) protein (251aa)
DNA repair protein RadC n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYL9_ACICJ
DNA repair protein RadC; K03630 DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:EGO96436.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_49_6
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3449..4186)
DNA (738bp) protein (246aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Methionine aminopeptidase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IYM5_ACIMA
04302015_21_scaffold_49_7
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4287..5480)
DNA (1194bp) protein (398aa)
Putative major facilitator superfamily transporter n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IYM4_ACIMA
putative major facilitator superfamily transporter; K08224 MFS transporter, YNFM family, putative membrane transport protein
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:BAJ80884.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_49_8
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5596..6006)
DNA (411bp) protein (137aa)
Rhodanese domain protein n=3 Tax=Acidiphilium RepID=A5FYL6_ACICJ
hypothetical protein
Rhodanese domain protein {ECO:0000313|EMBL:ABQ30698.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_49_9
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6114..7112
DNA (999bp) protein (333aa)
cysteine synthase A; K01738 cysteine synthase A [EC:2.5.1.47] rbh
Putative cystathionine beta-synthase Cbs {ECO:0000313|EMBL:KDM67892.1}; EC=4.2.1.22 {ECO:0000313|EMBL:KDM67892.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYL5_ACICJ rbh
04302015_21_scaffold_49_10
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7180..7821)
DNA (642bp) protein (214aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5); K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B {ECO:0000313|EMBL:KDM67146.1}; EC=2.8.3.5 {ECO:0000313|EMBL:KDM67146.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Butyryl-CoA:acetate CoA transferase n=3 Tax=Acidiphilium RepID=A5G0S1_ACICJ
04302015_21_scaffold_49_11
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7833..8534)
DNA (702bp) protein (234aa)
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:EGO96120.1}; EC=2.8.3.5 {ECO:0000313|EMBL:EGO96120.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5); K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] rbh
3-oxoacid CoA-transferase, A subunit n=1 Tax=Acidiphilium sp. PM RepID=F7S3Z3_9PROT rbh
04302015_21_scaffold_49_12
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8536..9708)
DNA (1173bp) protein (391aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EGO96119.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EGO96119.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Acetyl-CoA acetyltransferase n=2 Tax=Acidiphilium RepID=A5G0R9_ACICJ
04302015_21_scaffold_49_13
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9760..11001)
DNA (1242bp) protein (414aa)
phbC; putative poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-); K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Putative poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:BAJ81856.1}; EC=2.3.1.- {ECO:0000313|EMBL:BAJ81856.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Alpha/beta hydrolase fold protein n=2 Tax=Acidiphilium RepID=F7S3Z1_9PROT
04302015_21_scaffold_49_14
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11353..11970
DNA (618bp) protein (206aa)
Polyhydroxyalkonate synthesis repressor, PhaR n=3 Tax=Acidiphilium RepID=A5G0R5_ACICJ
phaR; polyhydroxyalkanoate synthesis repressor PhaR
Polyhydroxyalkonate synthesis repressor, PhaR {ECO:0000313|EMBL:EGO96116.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_49_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11970..14375
DNA (2406bp) protein (802aa)
glucan 1,4-alpha-glucosidase (EC:3.2.1.3); K01178 glucoamylase [EC:3.2.1.3] rbh
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:ABE61845.1}; EC=3.2.1.3 {ECO:0000313|EMBL:ABE61845.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Glucan 1,4-alpha-glucosidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPK2_NITHX rbh
04302015_21_scaffold_49_16
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14350..15930)
DNA (1581bp) protein (527aa)
Outer membrane efflux protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4D2_ACIMA
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:BAJ79984.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_49_17
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15920..17470)
DNA (1551bp) protein (517aa)
EmrB/QacA family drug resistance transporter n=1 Tax=Acidiphilium sp. PM RepID=F7S6J9_9PROT
EmrB/QacA family drug resistance transporter {ECO:0000313|EMBL:EGO95240.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
emrB; multidrug resistance protein; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
04302015_21_scaffold_49_18
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17478..18509)
DNA (1032bp) protein (344aa)
HlyD family secretion protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4D0_ACIMA rbh
HlyD family secretion protein; K03543 multidrug resistance protein A rbh
HlyD family secretion protein {ECO:0000313|EMBL:BAJ79982.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_49_19
unknown

Not on your lists

comp(18927..19250)
DNA (324bp) protein (108aa)

This feature has no annotations

04302015_21_scaffold_49_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19356..20288)
DNA (933bp) protein (311aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FW02_ACICJ
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ABQ29784.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_49_21
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20341..20823)
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FW00_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ29782.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_49_22
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20823..21161)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YYW0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN80243.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_21_scaffold_49_23
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21204..22292)
DNA (1089bp) protein (363aa)
Diguanylate phosphodiesterase n=1 Tax=Acidiphilium sp. PM RepID=F7S1V2_9PROT
diguanylate phosphodiesterase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EGO96874.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_49_24
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22396..23271)
DNA (876bp) protein (292aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] rbh
Pantothenate synthetase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z0V8_9PROT
04302015_21_scaffold_49_25
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23487..25184
DNA (1698bp) protein (566aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4C3_ACIMA rbh
ABC transporter ATP-binding protein/permease; K16013 ATP-binding cassette, subfamily C, bacterial CydD rbh
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:BAJ79975.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_49_26
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25181..26836
DNA (1656bp) protein (552aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4C2_ACIMA
ABC transporter ATP-binding protein/permease; K16012 ATP-binding cassette, subfamily C, bacterial CydC
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:BAJ79974.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_49_27
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26861..28114
DNA (1254bp) protein (418aa)
Putative O-Antigen Polymerase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HRI4_GLUDA rbh
O-antigen polymerase rbh
Putative O-Antigen Polymerase {ECO:0000313|EMBL:CAP56918.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
04302015_21_scaffold_49_28
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28197..28592)
DNA (396bp) protein (132aa)
Cytochrome c, class I n=3 Tax=Acidiphilium RepID=A5G0B6_ACICJ
cytochrome c, class I; K08738 cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABQ31298.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_49_29
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28619..29953)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G0B7_ACICJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ31299.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_49_30
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30201..31472)
DNA (1272bp) protein (424aa)
cytochrome P450 n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037BA7AE rbh
cytochrome P450 rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying items 1-30 of 80 in total

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