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04302015_21_scaffold_57

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_57_1
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

547..1425
DNA (879bp) protein (293aa)
Glutathione S-transferase, N-terminal domain protein n=3 Tax=Acidiphilium RepID=A5G150_ACICJ rbh
glutathione S-transferase family protein; K11209 GST-like protein rbh
Glutathione S-transferase, N-terminal domain protein {ECO:0000313|EMBL:ABQ31582.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_57_2
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1467..1718)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KDM65304.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_57_3
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1827..2705
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000369E128
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AGL18154.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
04302015_21_scaffold_57_4
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2707..3165
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4Z3H1_BRASO
hypothetical protein; K09958 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL80697.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
04302015_21_scaffold_57_5
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3289..4434
DNA (1146bp) protein (382aa)
MscS mechanosensitive ion channel n=1 Tax=Acidiphilium sp. PM RepID=F7S3V0_9PROT rbh
MscS mechanosensitive ion channel {ECO:0000313|EMBL:EGO96178.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
putative MscS family transporter rbh
04302015_21_scaffold_57_6
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4707..6668
DNA (1962bp) protein (654aa)
Putative uncharacterized protein n=3 Tax=Acidithiobacillus RepID=B5EQ06_ACIF5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACH84801.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
04302015_21_scaffold_57_7

Not on your lists

6671..8536
DNA (1866bp) protein (622aa)
Uncharacterized protein (Fragment) n=2 Tax=mine drainage metagenome RepID=T0YQ20_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD37656.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein rbh
04302015_21_scaffold_57_8
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8563..9369)
DNA (807bp) protein (269aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Pseudomonas putida S610 RepID=V6J6H6_PSEPU
Short-chain dehydrogenase {ECO:0000313|EMBL:KDR40474.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
04302015_21_scaffold_57_9
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9308..10138)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S529_9BURK
3-keto-5-aminohexanoate cleavage protein {ECO:0000313|EMBL:KDR40480.1}; Uncharacterized protein {ECO:0000313|EMBL:CDY77035.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein rbh
04302015_21_scaffold_57_10
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10158..11606)
DNA (1449bp) protein (483aa)
Probable carboxylase n=1 Tax=Roseovarius sp. 217 RepID=A3VWM4_9RHOB
Probable carboxylase {ECO:0000313|EMBL:EAQ26854.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
carboxylase rbh
04302015_21_scaffold_57_11
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11603..12943)
DNA (1341bp) protein (447aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KGF70438.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KGF70438.1};; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
acetyl-CoA carboxylase biotin carboxylase subunit (EC:6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Roseovarius sp. 217 RepID=A3VWM3_9RHOB rbh
04302015_21_scaffold_57_12
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13053..13529
DNA (477bp) protein (159aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EAQ26851.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EAQ26851.1};; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
hypothetical protein; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3]
Acetyl-CoA carboxylase n=1 Tax=Roseovarius sp. 217 RepID=A3VWM1_9RHOB
04302015_21_scaffold_57_13
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13542..14279)
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5FZ74_ACICJ
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:ABQ30906.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_57_14
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14402..15853)
DNA (1452bp) protein (484aa)
Major facilitator superfamily MFS_1 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM79_DESK7 rbh
major facilitator superfamily protein; K08369 MFS transporter, putative metabolite:H+ symporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEG16047.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
04302015_21_scaffold_57_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15934..16836)
DNA (903bp) protein (301aa)
succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Succinyl-CoA synthetase (ADP-forming) alpha subunit {ECO:0000313|EMBL:ABJ07137.1}; EC=6.2.1.5 {ECO:0000313|EMBL:ABJ07137.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Succinyl-CoA synthetase (ADP-forming) alpha subunit n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LP7_RHOP5
04302015_21_scaffold_57_16
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16833..17960)
DNA (1128bp) protein (376aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] rbh
Succinyl-CoA synthetase, beta subunit {ECO:0000313|EMBL:CAX22412.1}; EC=6.2.1.5 {ECO:0000313|EMBL:CAX22412.1};; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
Succinyl-CoA synthetase, beta subunit n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBP1_METED rbh
04302015_21_scaffold_57_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17971..19395)
DNA (1425bp) protein (475aa)
Aldehyde Dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8B0M1_AZOBR rbh
aldehyde Dehydrogenase rbh
Aldehyde Dehydrogenase {ECO:0000313|EMBL:CCD03730.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
04302015_21_scaffold_57_18
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19435..20433)
DNA (999bp) protein (333aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:AIB16095.1}; EC=2.3.1.8 {ECO:0000313|EMBL:AIB16095.1};; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Phosphate acetyltransferase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8B0L7_AZOBR
pta2; phosphate acetyltransferase
04302015_21_scaffold_57_19
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20452..21375)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036B50D3
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CCD03724.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
04302015_21_scaffold_57_20
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21595..22917
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003717B1A rbh
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABR63650.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
04302015_21_scaffold_57_21
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22914..24563
DNA (1650bp) protein (550aa)
glucose-methanol-choline oxidoreductase; K00108 choline dehydrogenase [EC:1.1.99.1] rbh
Choline dehydrogenase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PVR4_9BURK rbh
Choline dehydrogenase {ECO:0000313|EMBL:AHB76444.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
04302015_21_scaffold_57_22
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24609..25790
DNA (1182bp) protein (394aa)
putative amidase (EC:3.5.1.-)
Putative amidase {ECO:0000313|EMBL:BAJ79616.1}; EC=3.5.1.- {ECO:0000313|EMBL:BAJ79616.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Putative amidase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J230_ACIMA
04302015_21_scaffold_57_23
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25780..26517)
DNA (738bp) protein (246aa)
ABC transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2A3_9PROT rbh
ABC transporter {ECO:0000313|EMBL:GAN80815.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
04302015_21_scaffold_57_24
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26529..27551)
DNA (1023bp) protein (341aa)
NMT1/THI5-like domain-containing protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XXG6_9PROT rbh
Pyrimidine moiety biosynthesis of thiamine NMT1/THI5 {ECO:0000313|EMBL:GAN80814.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
NMT1/THI5-like domain-containing protein rbh
04302015_21_scaffold_57_25
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27599..28462)
DNA (864bp) protein (288aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZPS1_9PROT rbh
Aliphatic sulfonates transporter permease {ECO:0000313|EMBL:GAN80813.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
binding-protein-dependent transport system inner membrane protein rbh
04302015_21_scaffold_57_26
unknown

Not on your lists

comp(28527..28745)
DNA (219bp) protein (73aa)

This feature has no annotations

04302015_21_scaffold_57_27
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28829..30343)
DNA (1515bp) protein (505aa)
GntR family transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YUE7_9PROT rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EKM98492.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase rbh
04302015_21_scaffold_57_28
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30557..30955
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YTV1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM98493.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_21_scaffold_57_29
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30964..32370
DNA (1407bp) protein (469aa)
FAD dependent oxidoreductase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XP81_9PROT rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EKM98494.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
FAD dependent oxidoreductase rbh
04302015_21_scaffold_57_30
Pseudomonas sp. H2, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32693..33733
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI000368A2CE
Aliphatic sulfonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGI92723.1}; TaxID=658612 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H2.;"
aliphatic sulfonate ABC transporter substrate-binding protein
Displaying items 1-30 of 43 in total

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