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04302015_21_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 88 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_74_1
unknown

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

04302015_21_scaffold_74_2
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114..1301)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2I8_ACIMA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ81932.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_74_3
Pseudoalteromonas sp. BSi20429, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1521..2144)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000364F70D
Transporter, LysE family {ECO:0000313|EMBL:GAA67001.1}; TaxID=1097676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas sp. BSi20429.;"
lysine exporter protein LysE/YggA
04302015_21_scaffold_74_4
unknown

Not on your lists

2259..2666
DNA (408bp) protein (136aa)

This feature has no annotations

04302015_21_scaffold_74_5
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3041..3508
DNA (468bp) protein (156aa)
30S ribosomal protein S6 n=2 Tax=Acidiphilium RepID=RS6_ACICJ
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_74_6
Acetobacter orleanensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3510..3785
DNA (276bp) protein (92aa)
30S ribosomal protein S18 n=2 Tax=Gluconacetobacter RepID=G2I5K8_GLUXN
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1231342 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orleanensis JCM 7639.;"
04302015_21_scaffold_74_7
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3798..4361
DNA (564bp) protein (188aa)
50S ribosomal protein L9 n=3 Tax=Acidiphilium RepID=RL9_ACICJ
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_74_8
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4495..5778
DNA (1284bp) protein (428aa)
cfa; cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:BAJ80901.1}; EC=2.1.1.79 {ECO:0000313|EMBL:BAJ80901.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IYP1_ACIMA rbh
04302015_21_scaffold_74_9
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5715..8600)
DNA (2886bp) protein (962aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] rbh
Glycine dehydrogenase (decarboxylating) n=1 Tax=Acidiphilium sp. PM RepID=F7S5H8_9PROT rbh
04302015_21_scaffold_74_10
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8597..8971)
DNA (375bp) protein (125aa)
Glycine cleavage system H protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J139_ACIMA
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_74_11
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8985..10085)
DNA (1101bp) protein (367aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
glycine cleavage system T protein; K00605 aminomethyltransferase [EC:2.1.2.10] rbh
Aminomethyltransferase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUJ6_ACICJ rbh
04302015_21_scaffold_74_12
unknown

Not on your lists

10491..10724
DNA (234bp) protein (78aa)

This feature has no annotations

04302015_21_scaffold_74_13
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10727..11314)
DNA (588bp) protein (196aa)
pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=3 Tax=Acidiphilium RepID=PDXH_ACICJ
04302015_21_scaffold_74_14
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11413..12261
DNA (849bp) protein (283aa)
short-chain dehydrogenase/reductase SDR; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=3 Tax=Acidiphilium RepID=A5FWR7_ACICJ
04302015_21_scaffold_74_15
unknown

Not on your lists

12258..12347
DNA (90bp) protein (30aa)

This feature has no annotations

04302015_21_scaffold_74_16
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12306..12512)
DNA (207bp) protein (69aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FWR8_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ30050.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_74_17
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12559..13323)
DNA (765bp) protein (255aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWR9_ACICJ rbh
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABQ30051.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_74_18
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13320..14063)
DNA (744bp) protein (248aa)
ABC transporter related protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWS0_ACICJ
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ABQ30052.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_74_19
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14077..15075)
DNA (999bp) protein (333aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein n=3 Tax=Acidiphilium RepID=A5FWS1_ACICJ
hypothetical protein
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein {ECO:0000313|EMBL:ABQ30053.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_74_20
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15193..15522
DNA (330bp) protein (110aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FWS2_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGO95485.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_74_21
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15571..16395)
DNA (825bp) protein (275aa)
Formate/nitrite transporter n=1 Tax=Acidiphilium sp. PM RepID=F7S5U0_9PROT rbh
putative formate transporter rbh
Formate/nitrite transporter {ECO:0000313|EMBL:EGO95486.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_74_22
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16525..16749)
DNA (225bp) protein (75aa)
hypothetical protein; K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
Formate dehydrogenase delta subunit {ECO:0000313|EMBL:ABQ30056.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABQ30056.1};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Formate dehydrogenase delta subunit n=3 Tax=Acidiphilium RepID=A5FWS4_ACICJ
04302015_21_scaffold_74_23
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16739..17566)
DNA (828bp) protein (276aa)
Protein FdhD homolog n=3 Tax=Acidiphilium RepID=A5FWS5_ACICJ rbh
fdhD; putative formate dehydrogenase subunit FdhD; K02379 FdhD protein rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_74_24
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17563..20400)
DNA (2838bp) protein (946aa)
Formate dehydrogenase alpha subunit {ECO:0000313|EMBL:KDM67384.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KDM67384.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
formate dehydrogenase alpha subunit (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
Formate dehydrogenase alpha subunit n=2 Tax=Acidiphilium RepID=A5FWS6_ACICJ rbh
04302015_21_scaffold_74_25
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20412..21962)
DNA (1551bp) protein (517aa)
Formate dehydrogenase beta subunit {ECO:0000313|EMBL:KDM67383.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KDM67383.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Formate dehydrogenase beta subunit n=3 Tax=Acidiphilium RepID=A5FWS7_ACICJ rbh
putative formate dehydrogenase subunit beta; K00124 formate dehydrogenase, beta subunit rbh
04302015_21_scaffold_74_26
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21962..22441)
DNA (480bp) protein (160aa)
Formate dehydrogenase gamma subunit {ECO:0000313|EMBL:KDM67382.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KDM67382.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
NADH dehydrogenase (Ubiquinone), 24 kDa subunit n=1 Tax=Acidiphilium sp. PM RepID=F7S5U5_9PROT
putative formate dehydrogenase gamma subunit; K00127 formate dehydrogenase, gamma subunit
04302015_21_scaffold_74_27
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22559..23446)
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWS9_ACICJ
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KDM67381.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_74_28
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23443..24516)
DNA (1074bp) protein (358aa)
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
Alcohol dehydrogenase {ECO:0000313|EMBL:EGO95492.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EGO95492.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Alcohol dehydrogenase GroES domain protein n=3 Tax=Acidiphilium RepID=A5FWT0_ACICJ
04302015_21_scaffold_74_29
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24573..25979)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FY08_ACICJ
hypothetical protein; K09760 DNA recombination protein RmuC
Uncharacterized protein {ECO:0000313|EMBL:ABQ30490.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_74_30
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25986..27791)
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Elongation factor 4 n=1 Tax=Acidiphilium sp. PM RepID=F7S2M9_9PROT rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA rbh
Displaying items 1-30 of 88 in total

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