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04302015_21_scaffold_83

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_83_1
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304..2469)
DNA (2166bp) protein (722aa)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
glcB; malate synthase G (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] rbh
Malate synthase G n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IXX1_ACIMA rbh
04302015_21_scaffold_83_2
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2620..5571
DNA (2952bp) protein (984aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S5F8_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KDM68632.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein rbh
04302015_21_scaffold_83_3
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5695..6843)
DNA (1149bp) protein (383aa)
putative coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Coproporphyrinogen III oxidase n=1 Tax=Acidiphilium sp. PM RepID=F7S502_9PROT
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:EGO95771.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_83_4
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7061..7858
DNA (798bp) protein (266aa)
30S ribosomal protein S2 n=2 Tax=Acidiphilium RepID=F0IZ75_ACIMA
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_83_5
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7907..8815
DNA (909bp) protein (303aa)
Elongation factor Ts n=3 Tax=Acidiphilium RepID=EFTS_ACICJ rbh
tsf; elongation factor Ts; K02357 elongation factor Ts rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_83_6
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9017..12229
DNA (3213bp) protein (1071aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3K7_ACIMA
Hint domain-containing protein {ECO:0000313|EMBL:KDM68674.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein
04302015_21_scaffold_83_7
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12293..12748
DNA (456bp) protein (152aa)
Large-conductance mechanosensitive channel n=3 Tax=Acidiphilium RepID=A5FY72_ACICJ
mscL; large conductance mechanosensitive channel protein; K03282 large conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_83_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12749..14257)
DNA (1509bp) protein (503aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Signal transduction histidine kinase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FVP4_ACICJ rbh
integral membrane sensor signal transduction histidine kinase rbh
04302015_21_scaffold_83_9
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14264..14947)
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Acidiphilium RepID=A5FVP3_ACICJ
two-component response regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABQ29675.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_83_10
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14947..16020)
DNA (1074bp) protein (358aa)
Endopeptidase degP n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YX94_9PROT rbh
Endopeptidase degP {ECO:0000313|EMBL:EKM99598.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_21_scaffold_83_11
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16289..16702
DNA (414bp) protein (138aa)
HPr kinase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
Hpr(Ser) kinase/phosphatase {ECO:0000313|EMBL:KDM68700.1}; EC=2.7.1.- {ECO:0000313|EMBL:KDM68700.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Hpr(Ser) kinase/phosphatase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FVP0_ACICJ
04302015_21_scaffold_83_12
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16713..17669
DNA (957bp) protein (319aa)
UPF0042 nucleotide-binding protein ACMV_05410 n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3N2_ACIMA
hypothetical protein; K06958 UPF0042 nucleotide-binding protein
Nucleotide-binding protein ACIDI_3c00580 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_83_13
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17683..18105
DNA (423bp) protein (141aa)
PTS system transporter subunit IIA (EC:2.7.1.-); K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69]
Phosphotransferase system enzyme IIA component {ECO:0000313|EMBL:KDM68698.1}; EC=2.7.1.- {ECO:0000313|EMBL:KDM68698.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
PTS system fructose subfamily IIA component n=3 Tax=Acidiphilium RepID=A5FVN8_ACICJ
04302015_21_scaffold_83_14
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18115..18414
DNA (300bp) protein (100aa)
Phosphotransferase system, phosphocarrier protein HPr n=3 Tax=Acidiphilium RepID=A5FVN7_ACICJ
phosphotransferase system, phosphocarrier protein HPr; K11189 phosphocarrier protein
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:ABQ29669.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_83_15
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18433..20235
DNA (1803bp) protein (601aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
phosphoenolpyruvate-protein phosphotransferase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YU94_9PROT
04302015_21_scaffold_83_16
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20311..21036)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3M9_ACIMA rbh
hypothetical protein; K06890 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ79885.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_83_17
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21275..21544)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=3 Tax=Acidiphilium RepID=RS15_ACICJ
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_83_18
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21561..22502)
DNA (942bp) protein (314aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] rbh
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryp
tRNA pseudouridine synthase B n=3 Tax=Acidiphilium RepID=A5FVN4_ACICJ rbh
04302015_21_scaffold_83_19
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22550..23200)
DNA (651bp) protein (217aa)
Methionine biosynthesis protein MetW n=3 Tax=Acidiphilium RepID=A5FVM9_ACICJ
metW; methionine biosynthesis protein MetW
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:ABQ29661.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_83_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23200..24342)
DNA (1143bp) protein (381aa)
metX; homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
Homoserine O-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_00296}; EC=2.3.1.31 {ECO:0000255|HAMAP-Rule:MF_00296};; Homoserine O-trans-acetylase {ECO:0000255|HAMAP-Rule:MF_00296}; Short=HTA {ECO:0000255|HAMAP-Rule:MF_00296};; Short=Homoserine transacetylase {ECO:0000255|HAMAP-Rule:MF_00296};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Homoserine O-acetyltransferase n=2 Tax=Acidiphilium RepID=METX_ACICJ
04302015_21_scaffold_83_21
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24509..25405
DNA (897bp) protein (299aa)
putative chorismate mutase (EC:5.4.99.5) rbh
Chorismate mutase n=1 Tax=Acidiphilium sp. PM RepID=F7S486_9PROT rbh
Chorismate mutase {ECO:0000313|EMBL:EGO95996.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_83_22
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25402..26523
DNA (1122bp) protein (374aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
Histidinol-phosphate aminotransferase {ECO:0000255|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000255|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000255|HAMAP-Rule:MF_01023}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Histidinol-phosphate aminotransferase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=HIS8_ACICJ rbh
04302015_21_scaffold_83_23
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26516..27418
DNA (903bp) protein (301aa)
prephenate dehydrogenase (EC:1.3.1.12); K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
Prephenate dehydrogenase {ECO:0000313|EMBL:BAJ79882.1}; EC=1.3.1.12 {ECO:0000313|EMBL:BAJ79882.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Prephenate dehydrogenase n=2 Tax=Acidiphilium RepID=A5FVN3_ACICJ
04302015_21_scaffold_83_24
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27419..27682)
DNA (264bp) protein (88aa)
Cell division topological specificity factor n=3 Tax=Acidiphilium RepID=MINE_ACICJ
minE; cell division topological specificity factor; K03608 cell division topological specificity factor
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_83_25
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27679..28494)
DNA (816bp) protein (272aa)
Site-determining protein n=3 Tax=Acidiphilium RepID=A5G010_ACICJ rbh
minD; septum site-determining protein MinD; K03609 septum site-determining protein MinD rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_83_26
unknown

Not on your lists

comp(28448..28570)
DNA (123bp) protein (41aa)

This feature has no annotations

04302015_21_scaffold_83_27
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28509..29183)
DNA (675bp) protein (225aa)
Probable septum site-determining protein MinC n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G011_ACICJ
minC; septum formation inhibitor; K03610 septum site-determining protein MinC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_83_28
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29372..30358)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0P8_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ81584.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_83_29
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30479..32059
DNA (1581bp) protein (527aa)
Protein translocase subunit SecD n=2 Tax=Acidiphilium RepID=F0J0P9_ACIMA rbh
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_83_30
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32085..33053
DNA (969bp) protein (323aa)
Protein-export membrane protein SecF n=2 Tax=Acidiphilium RepID=F0J0Q0_ACIMA
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
secF; protein-export membrane protein SecF
Displaying items 1-30 of 46 in total

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