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04302015_21_scaffold_103

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_103_1
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

295..1755
DNA (1461bp) protein (487aa)
isocitrate dehydrogenase (EC:1.1.1.41); K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
Isocitrate dehydrogenase {ECO:0000313|EMBL:EGO93743.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EGO93743.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Isocitrate dehydrogenase (NAD(+)) n=2 Tax=Acidiphilium RepID=A5G047_ACICJ rbh
04302015_21_scaffold_103_2
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1928..2158
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQ42_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG40480.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
hypothetical protein
04302015_21_scaffold_103_3
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2313..2732)
DNA (420bp) protein (140aa)
Membrane protein-like protein n=2 Tax=Acidiphilium RepID=A5G046_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDM66871.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_103_4
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2895..3836)
DNA (942bp) protein (314aa)
glutathione synthetase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3]
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Glutathione synthetase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G043_ACICJ
04302015_21_scaffold_103_5
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3879..4280)
DNA (402bp) protein (134aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G042_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31224.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_103_6
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4314..4775)
DNA (462bp) protein (154aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G041_ACICJ
hypothetical protein
Cell shape determination CcmA {ECO:0000313|EMBL:KDM66875.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_103_7
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5267..6265
DNA (999bp) protein (333aa)
Putative sugar kinase {ECO:0000313|EMBL:BAJ81614.1}; EC=2.7.1.- {ECO:0000313|EMBL:BAJ81614.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
PfkB domain protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G040_ACICJ
ribokinase-like domain-containing protein
04302015_21_scaffold_103_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6440..6625
DNA (186bp) protein (62aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
04302015_21_scaffold_103_9
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6801..7628
DNA (828bp) protein (276aa)
SAF domain protein n=2 Tax=Acidiphilium RepID=A5G038_ACICJ rbh
SAF domain protein {ECO:0000313|EMBL:ABQ31220.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
putative pilus assembly protein; K02279 pilus assembly protein CpaB rbh
04302015_21_scaffold_103_10
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7665..8849
DNA (1185bp) protein (395aa)
Flp pilus assembly protein ATPase CpaE-like protein n=3 Tax=Acidiphilium RepID=A5G037_ACICJ rbh
Flp pilus assembly protein ATPase CpaE-like protein; K02282 pilus assembly protein CpaE rbh
Flp pilus assembly protein ATPase CpaE-like protein {ECO:0000313|EMBL:ABQ31219.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_103_11
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8846..10207
DNA (1362bp) protein (454aa)
Type II secretion system protein E n=3 Tax=Acidiphilium RepID=A5G036_ACICJ
type II secretion system protein E; K02283 pilus assembly protein CpaF
Type II secretion system protein E {ECO:0000313|EMBL:EGO93754.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_103_12
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10204..11148
DNA (945bp) protein (315aa)
Type II secretion system protein n=3 Tax=Acidiphilium RepID=A5G035_ACICJ
putative type II secretion system protein; K12510 tight adherence protein B
Type II secretion system protein {ECO:0000313|EMBL:ABQ31217.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_103_13
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11145..12065
DNA (921bp) protein (307aa)
Type II secretion system protein n=2 Tax=Acidiphilium RepID=F7SAT5_9PROT
putative type II secretion system protein; K12511 tight adherence protein C
Type II secretion system protein {ECO:0000313|EMBL:EGO93756.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_103_14
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12034..12642)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G197_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31629.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_103_15
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12819..14240
DNA (1422bp) protein (474aa)
Putative major facilitator superfamily transporter n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3W1_ACIMA
putative major facilitator superfamily transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABQ31630.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_103_16
unknown

Not on your lists

comp(14154..14363)
DNA (210bp) protein (70aa)

This feature has no annotations

04302015_21_scaffold_103_17
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14463..14756)
DNA (294bp) protein (98aa)
SirA family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZF5_ACIMA
SirA family protein
SirA family protein {ECO:0000313|EMBL:BAJ81165.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_103_18
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14912..15349
DNA (438bp) protein (146aa)
Transcriptional regulator n=3 Tax=Acidiphilium RepID=A5FZE1_ACICJ
MucR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABQ30973.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_103_19

Not on your lists

comp(15353..16291)
DNA (939bp) protein (313aa)
CAAX amino terminal protease family protein n=1 Tax=mine drainage metagenome RepID=T0ZVE8_9ZZZZ
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EQD32619.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CAAX amino terminal protease
04302015_21_scaffold_103_20
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16288..17301)
DNA (1014bp) protein (338aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Ferredoxin--NADP reductase n=3 Tax=Acidiphilium RepID=FENR_ACICJ
04302015_21_scaffold_103_21
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17413..17871
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5FYH9_ACICJ
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:KDM66259.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein; K06925 UPF0079 ATP-binding protein
04302015_21_scaffold_103_22
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17868..20783
DNA (2916bp) protein (972aa)
Inactivated superfamily I helicase-like protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYI0_ACICJ rbh
Inactivated superfamily I helicase-like protein {ECO:0000313|EMBL:ABQ30662.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
hypothetical protein rbh
04302015_21_scaffold_103_23
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20780..24217
DNA (3438bp) protein (1146aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
addA; double-strand break repair helicase AddA (EC:3.6.4.12)
UvrD-like DNA helicase n=1 Tax=Acidiphilium sp. PM RepID=F7S331_9PROT
04302015_21_scaffold_103_24
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24305..25351
DNA (1047bp) protein (349aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1B1_ACIMA rbh
NAD-dependent epimerase/dehydratase family protein rbh
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAJ79493.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_21_scaffold_103_25
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25359..26498
DNA (1140bp) protein (380aa)
Glycosyl transferase, family 2 n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUR6_ACICJ
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABQ29348.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_21_scaffold_103_26
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26498..27340
DNA (843bp) protein (281aa)
putative squalene/phytoene synthase (EC:2.5.1.-) rbh
Putative squalene/phytoene synthase {ECO:0000313|EMBL:BAJ79491.1}; EC=2.5.1.- {ECO:0000313|EMBL:BAJ79491.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Putative squalene/phytoene synthase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1A9_ACIMA rbh
04302015_21_scaffold_103_27
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27337..28212
DNA (876bp) protein (292aa)
putative squalene/phytoene synthase (EC:2.5.1.-); K02291 phytoene synthase [EC:2.5.1.32]
Putative squalene/phytoene synthase {ECO:0000313|EMBL:BAJ79490.1}; EC=2.5.1.- {ECO:0000313|EMBL:BAJ79490.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Putative squalene/phytoene synthase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J1A8_ACIMA
04302015_21_scaffold_103_28
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28209..29462
DNA (1254bp) protein (418aa)
Amine oxidase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUR3_ACICJ
Amine oxidase {ECO:0000313|EMBL:KDM67260.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
amine oxidase
04302015_21_scaffold_103_29
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29485..30324)
DNA (840bp) protein (280aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABQ31227.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ABQ31227.1};; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
N-acetylmuramoyl-L-alanine amidase n=3 Tax=Acidiphilium RepID=A5G045_ACICJ rbh
04302015_21_scaffold_103_30
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30409..31476)
DNA (1068bp) protein (356aa)
putative amine oxidase; K00274 monoamine oxidase [EC:1.4.3.4] rbh
Putative amine oxidase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0M5_ACIMA rbh
Putative amine oxidase {ECO:0000313|EMBL:BAJ81561.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Displaying items 1-30 of 52 in total

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