ggKbase home page

04302015_21_scaffold_297

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_297_1
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..811
DNA (810bp) protein (270aa)
cysN_cysC; sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (EC:2.7.1.25 2.7.7.4); K00955 bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
Bifunctional enzyme nodQ {ECO:0000313|EMBL:EGO96295.1}; EC=2.7.1.25 {ECO:0000313|EMBL:EGO96295.1};; EC=2.7.7.4 {ECO:0000313|EMBL:EGO96295.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Adenylylsulfate kinase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FY48_ACICJ
04302015_21_scaffold_297_2
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

906..2417
DNA (1512bp) protein (504aa)
fatty acid CoA ligase (EC:6.2.1.3)
Acyl-CoA synthase n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX11_PELBH
Acyl-CoA synthase {ECO:0000313|EMBL:EAU48391.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
04302015_21_scaffold_297_3
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2479..3615)
DNA (1137bp) protein (379aa)
OmpA/MotB domain protein n=3 Tax=Acidiphilium RepID=A5FUW9_ACICJ rbh
putative outer membrane protein rbh
Outer membrane protein {ECO:0000313|EMBL:KDM66458.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_21_scaffold_297_4
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3844..4311
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YXK6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM99713.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_21_scaffold_297_5
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4461..4748)
DNA (288bp) protein (96aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IK38_XANP2
excinuclease ABC subunit C
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
04302015_21_scaffold_297_6
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5092..5637)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YXC1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM99628.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_21_scaffold_297_7
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5772..7097)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G070_ACICJ
Outer membrane protein {ECO:0000313|EMBL:KDM66619.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein
04302015_21_scaffold_297_8
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7917..8591
DNA (675bp) protein (225aa)
Alanine racemase domain protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZDT6_GLUDA
alanine racemase domain-containing protein; K06997
Alanine racemase domain protein {ECO:0000313|EMBL:ACI50420.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
04302015_21_scaffold_297_9
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8878..9996)
DNA (1119bp) protein (373aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acid
purK; 5-(carboxyamino)imidazole ribonucleotide synthase (EC:6.3.4.18); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YVB1_9PROT rbh
04302015_21_scaffold_297_10
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9993..10475)
DNA (483bp) protein (161aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; N5-carboxyaminoimidazole ribonucleotide mutase; Short=N5-CAIR mutase;; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodosp
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YIP8_9PROT
04302015_21_scaffold_297_11
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10472..10675)
DNA (204bp) protein (68aa)
Putative cytoplasmic protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZGV3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN80460.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_21_scaffold_297_12
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10854..11027
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5FYY1_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAN79896.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_297_13
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11424..12998
DNA (1575bp) protein (525aa)
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
2-isopropylmalate synthase n=3 Tax=Acidiphilium RepID=A5FVX6_ACICJ
04302015_21_scaffold_297_14
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13488..14528
DNA (1041bp) protein (347aa)
Rod shape-determining protein MreB n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZJX2_9PROT rbh
Rod shape-determining protein MreB {ECO:0000313|EMBL:EKM99710.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
04302015_21_scaffold_297_15
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14877..15089)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003685A02
ohr; organic hydroperoxide resistance protein
OsmC family protein {ECO:0000313|EMBL:EGO95469.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_21_scaffold_297_16
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15295..16509)
DNA (1215bp) protein (405aa)
Class I and II aminotransferase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2P6_9PROT rbh
Class I and II aminotransferase {ECO:0000313|EMBL:EKN01409.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
class I and II aminotransferase
04302015_21_scaffold_297_17
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16545..17078)
DNA (534bp) protein (178aa)
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases n=1 Tax=Burkholderia cenocepacia H111 RepID=G7HL94_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDB07388.1}; Flags: Precursor;; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
hypothetical protein
Displaying 17 items

View Taxonomy