ggKbase home page

04302015_21_scaffold_529

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_529_1
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..586)
DNA (585bp) protein (195aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit L n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YKD8_9PROT
NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:GAN79715.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_529_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(588..896)
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZIP3_9PROT
04302015_21_scaffold_529_3
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(896..1405)
DNA (510bp) protein (170aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:EFH10015.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EFH10015.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRP6_9PROT
04302015_21_scaffold_529_4
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1415..1900)
DNA (486bp) protein (162aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
NADH dehydrogenase subunit I (EC:1.6.5.3); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit I n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=NUOI_GRABC
04302015_21_scaffold_529_5
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1922..2935)
DNA (1014bp) protein (338aa)
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
NADH-quinone oxidoreductase subunit H n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J650_ACIMA
04302015_21_scaffold_529_6
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2932..4977)
DNA (2046bp) protein (682aa)
nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3]
NADH dehydrogenase subunit G n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YKD3_9PROT rbh
NADH-quinone oxidoreductase subunit G {ECO:0000313|EMBL:GAN79720.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_529_7
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4981..6276)
DNA (1296bp) protein (432aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
NADH dehydrogenase I subunit F n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZIN9_9PROT rbh
NADH dehydrogenase I subunit F/NADH-quinone oxidoreductase subunit F {ECO:0000313|EMBL:GAN79721.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_21_scaffold_529_8
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6280..6903)
DNA (624bp) protein (208aa)
NADH-quinone oxidoreductase chain E (EC:1.6.5.3); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit E n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XRR3_9PROT
NADH-quinone oxidoreductase subunit E {ECO:0000313|EMBL:EKM99334.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_21_scaffold_529_9
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6900..8102)
DNA (1203bp) protein (401aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
NADH dehydrogenase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit D n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YWF2_9PROT rbh
04302015_21_scaffold_529_10
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8106..8723)
DNA (618bp) protein (206aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit C n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YX10_9PROT
04302015_21_scaffold_529_11
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8716..9270)
DNA (555bp) protein (185aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
NADH dehydrogenase subunit B (EC:1.6.5.3); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit B n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=NUOB_GRABC rbh
04302015_21_scaffold_529_12
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9275..9640)
DNA (366bp) protein (122aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
NADH-quinone oxidoreductase chain A (EC:1.6.5.3); K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSK2_GRABC
04302015_21_scaffold_529_trna_2
unknown

Not on your lists

comp(9750..9823)
DNA (74bp)
transferRNA
04302015_21_scaffold_529_trna_1
unknown

Not on your lists

comp(9891..9962)
DNA (72bp)
transferRNA
04302015_21_scaffold_529_13
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10091..10363)
DNA (273bp) protein (91aa)
Histone-like DNA-binding protein HU n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XRQ9_9PROT
Histone-like bacterial DNA-binding protein HU {ECO:0000313|EMBL:GAN79727.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hu; histone-like bacterial DNA-binding protein HU; K03530 DNA-binding protein HU-beta
04302015_21_scaffold_529_14
unknown

Not on your lists

comp(10502..10624)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 16 items

View Taxonomy