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04302015_21_scaffold_136

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_136_1
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3..2018)
DNA (2016bp) protein (672aa)
Cl-channel voltage-gated family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZY8_9CHLR rbh
H(+)/Cl(-) exchange transporter ClcA {ECO:0000313|EMBL:KJF18487.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
chloride channel transporter; K03281 chloride channel protein, CIC family
04302015_21_scaffold_136_2
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2015..2497)
DNA (483bp) protein (161aa)
EstGX1 n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LLY4_9ACTO
Transcriptional repressor MprA {ECO:0000313|EMBL:KJF18488.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
EstGX1
04302015_21_scaffold_136_3
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(2534..3220)
DNA (687bp) protein (229aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=926567 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio velox DSM 12556.;"
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermanaerovibrio velox DSM 12556 RepID=H0UQ53_9BACT
04302015_21_scaffold_136_4
CG_Wirth_01, Wirthbacteria, Bacteria

Not on your lists

3251..3565
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FQ07_9BACT
TrpR-like protein, YerC/YecD
Tax=CG_Wirth_01
04302015_21_scaffold_136_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

3562..4419
DNA (858bp) protein (286aa)
ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase id=4691463 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
04302015_21_scaffold_136_6
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

4416..5474
DNA (1059bp) protein (353aa)
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] id=14628835 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23]
Tax=CSP1_4_Chloroflexi
04302015_21_scaffold_136_7

Not on your lists

5471..6988
DNA (1518bp) protein (506aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|SAAS:SAAS00218099}; EC=2.6.1.- {ECO:0000256|SAAS:SAAS00276846};; EC=2.6.1.9 {ECO:0000256|SAAS:SAAS00083672};; EC=4.2.1.19 {ECO:0000256|SAAS:SAAS00263879};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003658106
hypothetical protein
04302015_21_scaffold_136_8
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6985..7536
DNA (552bp) protein (184aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UE28_9RHOB
04302015_21_scaffold_136_9
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7518..8264
DNA (747bp) protein (249aa)
hisF; imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-]
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MPP9_CORCM
04302015_21_scaffold_136_10
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8261..8809
DNA (549bp) protein (183aa)
phosphoribosyl-ATP diphosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19]
Histidine biosynthesis bifunctional protein HisIE n=83 Tax=Klebsiella pneumoniae RepID=J1TKH4_KLEPN
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
04302015_21_scaffold_136_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8806..9672)
DNA (867bp) protein (289aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM32_PSEUX
extradiol ring-cleavage dioxygenase class III protein subunit B
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:AEA22519.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
04302015_21_scaffold_136_12
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9698..10867
DNA (1170bp) protein (390aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
glycoside hydrolase protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Glycoside hydrolase family 3 domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVJ0_PSEUX
04302015_21_scaffold_136_13
unknown

Not on your lists

comp(10868..10999)
DNA (132bp) protein (44aa)

This feature has no annotations

04302015_21_scaffold_136_14
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11115..12707
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000371E4A6 rbh
Low-affinity putrescine importer PlaP {ECO:0000313|EMBL:KJE76463.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
amino acid permease-associated protein rbh
04302015_21_scaffold_136_15
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12765..13184)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002ED8824
dinitrogenase iron-molybdenum cofactor
Tax=BJP_08E140C01_Actinomycetales_67_18
04302015_21_scaffold_136_16
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13279..14553)
DNA (1275bp) protein (425aa)
glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
Glutamate dehydrogenase n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BC07_SANKS
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
04302015_21_scaffold_136_17
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14666..15712
DNA (1047bp) protein (349aa)
F420-dependent oxidoreductase n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI000345EE70 rbh
oxidoreductase rbh
Putative oxidoreductase {ECO:0000313|EMBL:AAZ55018.1}; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
04302015_21_scaffold_136_18
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15785..19225
DNA (3441bp) protein (1147aa)
indolepyruvate ferredoxin oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] rbh
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037CF2FE rbh
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:EME55162.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
04302015_21_scaffold_136_19
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19222..21177)
DNA (1956bp) protein (652aa)
ABC transporter related protein n=2 Tax=Streptomyces RepID=G2NJF7_9ACTO rbh
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial rbh
ABC transporter related protein {ECO:0000313|EMBL:AEN13031.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;"
04302015_21_scaffold_136_20
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21177..22916)
DNA (1740bp) protein (580aa)
ABC transporter n=2 Tax=Streptomyces avermitilis RepID=Q93HE2_STRAX rbh
ABC transporter {ECO:0000313|EMBL:EWM17890.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial rbh
04302015_21_scaffold_136_21
Dietzia sp. UCD-THP, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23008..23634
DNA (627bp) protein (209aa)
Uracil phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|SAAS:SAAS00084480};; TaxID=1292020 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia sp. UCD-THP.;"
upp; uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
uracil phosphoribosyltransferase n=1 Tax=Dietzia sp. UCD-THP RepID=UPI000364BDA0
Displaying 21 items

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