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04302015_21_scaffold_211

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_211_1
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(487..1440)
DNA (954bp) protein (318aa)
Tax=RBG_16_Actinobacteria_70_17_curated
04302015_21_scaffold_211_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1596..3890)
DNA (2295bp) protein (765aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000370BA80 rbh
putative cellulose synthase A catalytic subunit 2 rbh
Putative cellulose synthase A catalytic subunit 2 {ECO:0000313|EMBL:AGZ43924.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
04302015_21_scaffold_211_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4081..5622
DNA (1542bp) protein (514aa)
chitinase (EC:3.2.1.14); K01183 chitinase [EC:3.2.1.14] rbh
Chitinase {ECO:0000313|EMBL:ADB49320.1}; EC=3.2.1.14 {ECO:0000313|EMBL:ADB49320.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Chitinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBF1_CONWI rbh
04302015_21_scaffold_211_4
Streptomyces murayamaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5723..7294
DNA (1572bp) protein (524aa)
Putative transmembrane efflux protein n=1 Tax=Streptomyces murayamaensis RepID=Q84CL5_9ACTO
Putative transmembrane efflux protein {ECO:0000313|EMBL:AAO65328.1}; TaxID=224537 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces murayamaensis.;"
SC4H2.31c; transmembrane efflux protein
04302015_21_scaffold_211_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7362..8120
DNA (759bp) protein (253aa)
dehydrogenase with different specificities id=7720214 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC58313.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
short-chain dehydrogenase/reductase SDR
04302015_21_scaffold_211_6
unknown

Not on your lists

8167..8631
DNA (465bp) protein (155aa)

This feature has no annotations

04302015_21_scaffold_211_7
unknown

Not on your lists

comp(8632..9501)
DNA (870bp) protein (290aa)

This feature has no annotations

04302015_21_scaffold_211_8
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9498..9944)
DNA (447bp) protein (149aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000366B0BA
CMP/dCMP deaminase
04302015_21_scaffold_211_trna_1
unknown

Not on your lists

10021..10106
DNA (86bp)
transferRNA
04302015_21_scaffold_211_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10220..11551
DNA (1332bp) protein (444aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] rbh
4-aminobutyrate aminotransferase apoenzyme {ECO:0000313|EMBL:ABL82707.1}; EC=2.6.1.19 {ECO:0000313|EMBL:ABL82707.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
4-aminobutyrate aminotransferase n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F74A rbh
04302015_21_scaffold_211_10
unknown

Not on your lists

11551..12600
DNA (1050bp) protein (350aa)

This feature has no annotations

04302015_21_scaffold_211_11

Not on your lists

12645..13250
DNA (606bp) protein (202aa)
Membrane protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZBA9_9ZZZZ
Membrane protein {ECO:0000313|EMBL:EQD45296.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
04302015_21_scaffold_211_12
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(13216..14037)
DNA (822bp) protein (274aa)
Gll2346 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NI38_GLOVI
hypothetical protein
Gll2346 protein {ECO:0000313|EMBL:BAC90287.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
04302015_21_scaffold_211_13
unknown

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comp(14034..14192)
DNA (159bp) protein (53aa)

This feature has no annotations

04302015_21_scaffold_211_14
unknown

Not on your lists

14273..15514
DNA (1242bp) protein (414aa)

This feature has no annotations

04302015_21_scaffold_211_15
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15522..15995)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003822BF9
Uncharacterized protein {ECO:0000313|EMBL:KDF00172.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
hypothetical protein
04302015_21_scaffold_211_16
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16038..16565)
DNA (528bp) protein (176aa)
NAD-dependent epimerase/dehydratase; K06118 UDP-sulfoquinovose synthase [EC:3.13.1.1]
NAD-dependent epimerase/dehydratase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QK49_CATAD
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:EWM18360.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Displaying 17 items

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