ggKbase home page

04302015_21_scaffold_356

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_356_1

Not on your lists

comp(3..239)
DNA (237bp) protein (79aa)
Sporulation regulatory protein WhiB n=1 Tax=uncultured bacterium A1Q1_fos_515 RepID=L7VV30_9BACT
Sporulation regulatory protein WhiB {ECO:0000313|EMBL:AGC71339.1}; TaxID=1256581 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_515.;"
putative WhiB family transcriptional regulator
04302015_21_scaffold_356_2

Not on your lists

comp(338..2329)
DNA (1992bp) protein (664aa)
Long form Mg-chelase associated protein n=1 Tax=uncultured bacterium A1Q1_fos_515 RepID=L7VWB1_9BACT rbh
Long form Mg-chelase associated protein {ECO:0000313|EMBL:AGC71338.1}; TaxID=1256581 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_515.;"
hypothetical protein rbh
04302015_21_scaffold_356_3
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2329..3753)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZY37_9ACTN rbh
Magnesium chelatase, subunit ChlI {ECO:0000313|EMBL:KGA05148.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
hypothetical protein rbh
04302015_21_scaffold_356_4
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3790..4545)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B369E8
Uncharacterized protein {ECO:0000313|EMBL:KHL04023.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
ABC-2 type transporter
04302015_21_scaffold_356_5
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4538..6517)
DNA (1980bp) protein (660aa)
imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7] rbh
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SirexAA-E / ActE).;"
Imidazolonepropionase n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NCD6_9ACTO rbh
04302015_21_scaffold_356_6
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6514..8172)
DNA (1659bp) protein (553aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hutU; Urocanate hydratase (Urocanase) (Imidazolonepropionate hydrolase) (EC:4.2.1.49) rbh
Urocanate hydratase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EW92_MODMB rbh
04302015_21_scaffold_356_7
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8180..9709)
DNA (1530bp) protein (510aa)
hutH; histidine ammonia-lyase (EC:4.3.1.3) rbh
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
histidine ammonia-lyase n=1 Tax=Nocardiopsis xinjiangensis RepID=UPI0003470C7E rbh
04302015_21_scaffold_356_8
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(9706..10608)
DNA (903bp) protein (301aa)
Arginase/agmatinase/formiminoglutamase; K01479 formiminoglutamase [EC:3.5.3.8]
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00038293BF
Tax=BJP_IG2102_Coriobacteriales_64_17
04302015_21_scaffold_356_9
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10695..12233)
DNA (1539bp) protein (513aa)
Cytochrome b/b6 domain protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M191_ACIFD rbh
cytochrome b/b6 domain-containing protein; K03891 ubiquinol-cytochrome c reductase cytochrome b subunit rbh
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:ACU54739.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
04302015_21_scaffold_356_10
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12230..13006)
DNA (777bp) protein (259aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M192_ACIFD
Rieske (2Fe-2S) domain-containing protein; K03890 ubiquinol-cytochrome c reductase iron-sulfur subunit
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ACU54740.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
04302015_21_scaffold_356_11
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13003..13890)
DNA (888bp) protein (296aa)
Cytochrome c class I n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M193_ACIFD
cytochrome c class I; K03889 ubiquinol-cytochrome c reductase cytochrome c subunit
Cytochrome c class I {ECO:0000313|EMBL:ACU54741.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
04302015_21_scaffold_356_12
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13898..14428)
DNA (531bp) protein (177aa)
Cytochrome c oxidase subunit 3 {ECO:0000313|EMBL:KJF18014.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KJF18014.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase subunit III n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M194_ACIFD
04302015_21_scaffold_356_13
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(14502..16850)
DNA (2349bp) protein (783aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AIJ1_9ACTN rbh
hypothetical protein rbh
04302015_21_scaffold_356_14
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17001..17993
DNA (993bp) protein (331aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] rbh
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI0003624F89 rbh
04302015_21_scaffold_356_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

17990..18895
DNA (906bp) protein (302aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hemH; ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1W4_9CHLR
04302015_21_scaffold_356_16
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18896..19417
DNA (522bp) protein (174aa)
protoporphyrinogen oxidase n=1 Tax=Streptomyces RepID=UPI0003703B04
Putative protoporphyrinogen oxidase {ECO:0000313|EMBL:EPH41191.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
protoporphyrinogen oxidase
Displaying 16 items

View Taxonomy