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04302015_21_scaffold_439

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_439_1
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1..1248
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00037A50FB
Uncharacterized protein {ECO:0000313|EMBL:KJF17780.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
04302015_21_scaffold_439_2
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1260..2612
DNA (1353bp) protein (451aa)
Phosphomannomutase {ECO:0000313|EMBL:CCM61969.1}; EC=5.4.2.8 {ECO:0000313|EMBL:CCM61969.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] rbh
Phosphomannomutase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVJ2_9ACTN rbh
04302015_21_scaffold_439_3
unknown

Not on your lists

2609..2839
DNA (231bp) protein (77aa)

This feature has no annotations

04302015_21_scaffold_439_4

Not on your lists

comp(2842..3546)
DNA (705bp) protein (235aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZXV2_9ACTO
Thiolase {ECO:0000313|EMBL:KGA18453.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
04302015_21_scaffold_439_5

Not on your lists

comp(4031..4732)
DNA (702bp) protein (234aa)
Riboflavin synthase {ECO:0000313|EMBL:EQD48920.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EQD48920.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Riboflavin synthase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B3I6_9ZZZZ
riboflavin synthase
04302015_21_scaffold_439_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4785..6113
DNA (1329bp) protein (443aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EHN09526.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EHN09526.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Butyryl-CoA dehydrogenase n=1 Tax=Patulibacter medicamentivorans RepID=H0E9W6_9ACTN
acyl-CoA dehydrogenase domain-containing protein
04302015_21_scaffold_439_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6110..7060)
DNA (951bp) protein (317aa)
Putative luciferase-like monooxygenase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WBZ7_9ACTO rbh
putative luciferase-like monooxygenase rbh
Putative luciferase-like monooxygenase {ECO:0000313|EMBL:AGZ45481.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
04302015_21_scaffold_439_8
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7057..7836)
DNA (780bp) protein (260aa)
UDP-galactose-lipid carrier transferase n=1 Tax=Patulibacter americanus RepID=UPI0003B77F5C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG04598.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
04302015_21_scaffold_439_9
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7851..8396)
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZIT7_GLUDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI52727.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
04302015_21_scaffold_439_10
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8405..10105)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=2 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZIT7_GLUDA
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAP57316.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
04302015_21_scaffold_439_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10115..11851)
DNA (1737bp) protein (579aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LE33_9RHOB
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EJW11423.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
glycosyl transferase family protein
04302015_21_scaffold_439_12
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12039..13451
DNA (1413bp) protein (471aa)
Amino acid permease-associated region n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M0N8_ACIFD rbh
Putrescine importer PuuP {ECO:0000313|EMBL:KJE75815.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
amino acid permease-associated protein rbh
04302015_21_scaffold_439_13
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13456..14124
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AN84_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KIE52745.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
hypothetical protein
04302015_21_scaffold_439_14
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14287..14745
DNA (459bp) protein (153aa)
Putative transcriptional regulator, CopG family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRQ2_ACIC1
CopG family transcriptional regulator
Putative transcriptional regulator, CopG family {ECO:0000313|EMBL:ABK52112.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
04302015_21_scaffold_439_15
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14747..15559
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IWQ0_MYCSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB22752.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
04302015_21_scaffold_439_16
unknown

Not on your lists

15576..15908
DNA (333bp) protein (111aa)

This feature has no annotations

04302015_21_scaffold_439_17
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15905..16768)
DNA (864bp) protein (288aa)
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase id=4887605 bin=GWC2_Chloroflexi_73_18 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase
Tax=GWC2_RIF_CHLX_73_18_curated
04302015_21_scaffold_439_18
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17070..17672
DNA (603bp) protein (201aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J0D7_9PSEU
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB76935.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
04302015_21_scaffold_439_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(17615..18913)
DNA (1299bp) protein (433aa)
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81]
Hydroxypyruvate reductase {ECO:0000313|EMBL:ACZ37940.1}; EC=1.1.1.81 {ECO:0000313|EMBL:ACZ37940.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Hydroxypyruvate reductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C123_SPHTD
04302015_21_scaffold_439_20
unknown

Not on your lists

comp(19026..19226)
DNA (201bp) protein (67aa)

This feature has no annotations

04302015_21_scaffold_439_21
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19226..19588)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3815C
UPF0145 protein PAAL66ix_12562 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1117109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei A6-6i-x.;"
hypothetical protein
04302015_21_scaffold_439_22
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

19713..21113
DNA (1401bp) protein (467aa)
NAD-dependent malic enzyme {ECO:0000313|EMBL:KJE77440.1}; EC=1.1.1.38 {ECO:0000313|EMBL:KJE77440.1};; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
Malate dehydrogenase (EC:1.1.1.38); K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] rbh
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LXW8_ACIFD rbh
04302015_21_scaffold_439_23
unknown

Not on your lists

comp(21114..21638)
DNA (525bp) protein (175aa)

This feature has no annotations

04302015_21_scaffold_439_24
unknown

Not on your lists

comp(21635..22771)
DNA (1137bp) protein (379aa)

This feature has no annotations

04302015_21_scaffold_439_25
unknown

Not on your lists

22875..23510
DNA (636bp) protein (212aa)

This feature has no annotations

Displaying 25 items

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