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04302015_21_scaffold_655

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_655_1
unknown

Not on your lists

comp(3..209)
DNA (207bp) protein (69aa)

This feature has no annotations

04302015_21_scaffold_655_2
unknown

Not on your lists

comp(202..1314)
DNA (1113bp) protein (371aa)

This feature has no annotations

04302015_21_scaffold_655_3
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1314..1598)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M273_ACIFD
Uncharacterized protein {ECO:0000313|EMBL:KJF17930.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
04302015_21_scaffold_655_4
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1669..2961
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
histidine kinase (EC:2.7.13.3); K07768 two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
Histidine kinase n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M272_ACIFD
04302015_21_scaffold_655_5
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2958..3677
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00035FA5A2
Putative DNA-binding response regulator in two-component regulatory system phoB {ECO:0000313|EMBL:CCM63846.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
winged helix family two component transcriptional regulator; K07776 two-component system, OmpR family, response regulator RegX3
04302015_21_scaffold_655_6
marine actinobacterium MedAcidi-G2B, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3658..4962)
DNA (1305bp) protein (435aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
Serine--tRNA ligase n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M261_ACIFD rbh
Seryl-tRNA synthetase {ECO:0000313|EMBL:KIE50182.1}; TaxID=1550401 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2B.;"
04302015_21_scaffold_655_7
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5020..5928
DNA (909bp) protein (303aa)
ABC transporter related n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M262_ACIFD
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACU53160.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
04302015_21_scaffold_655_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5925..6656
DNA (732bp) protein (244aa)
ABC-2 type transporter n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A1U7_THECD
hypothetical protein; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
04302015_21_scaffold_655_9
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(6880..7416)
DNA (537bp) protein (179aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U6W1_DEIML
alkyl hydroperoxide reductase; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADV66800.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946; / LB-34).;"
04302015_21_scaffold_655_10
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7439..8353)
DNA (915bp) protein (305aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M0W9_ACIFD
04302015_21_scaffold_655_11
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

8545..9177
DNA (633bp) protein (211aa)
Cytochrome oxidase assembly protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F063_MODMB
Heme A synthase {ECO:0000313|EMBL:KJF17920.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
cytochrome oxidase assembly protein
04302015_21_scaffold_655_12
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9281..10486
DNA (1206bp) protein (402aa)
Putative Na(+)/H(+) antiporter n=1 Tax=uncultured archaeon RepID=D1JH24_9ARCH
sodium/hydrogen exchanger
Tax=RBG_16_Actinobacteria_68_21_curated
04302015_21_scaffold_655_13
unknown

Not on your lists

10593..10772
DNA (180bp) protein (60aa)

This feature has no annotations

04302015_21_scaffold_655_14
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10769..11392
DNA (624bp) protein (208aa)
Cytochrome b/b6 domain protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M0D8_ACIFD
Menaquinol-cytochrome c reductase cytochrome b subunit {ECO:0000313|EMBL:KJF18957.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
cytochrome b/b6 domain-containing protein
04302015_21_scaffold_655_15
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11389..12330
DNA (942bp) protein (314aa)
Cytochrome b/b6 domain protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M0D8_ACIFD rbh
Menaquinol-cytochrome c reductase cytochrome b subunit {ECO:0000313|EMBL:KJF18957.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
cytochrome b/b6 domain-containing protein rbh
04302015_21_scaffold_655_16
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12327..12689)
DNA (363bp) protein (121aa)
potassium-transporting ATPase subunit B; K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae
Potassium-transporting ATPase B chain n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AAP2_BURGB
04302015_21_scaffold_655_17
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12746..13615
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA07 RepID=V8E8M5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KFB70574.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
04302015_21_scaffold_655_18

Not on your lists

comp(13545..14048)
DNA (504bp) protein (168aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
ATPase, K+ transporting, A subunit (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Z3M4_9ZZZZ
ATPase, K+ transporting, A subunit {ECO:0000313|EMBL:EQD42546.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 18 items

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