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04302015_21_scaffold_4

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Displaying items 1-30 of 144 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_4_trna_2
unknown

Not on your lists

comp(248..318)
DNA (71bp)
transferRNA
04302015_21_scaffold_4_1
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

695..901
DNA (207bp) protein (69aa)
Sulfur carrier protein ThiS n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ACP3_ALKEH
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein
Sulfur carrier protein ThiS {ECO:0000313|EMBL:ABI55394.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
04302015_21_scaffold_4_2
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

955..1767
DNA (813bp) protein (271aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
Thiazole synthase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E783_9GAMM rbh
thiazole biosynthesis protein; K03149 thiamine biosynthesis ThiG rbh
04302015_21_scaffold_4_3
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2009..2752
DNA (744bp) protein (248aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQT1_THISH
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_21_scaffold_4_4
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3295..4173
DNA (879bp) protein (293aa)
phosphoribulokinase (EC:2.7.1.19); K00855 phosphoribulokinase [EC:2.7.1.19] rbh
Phosphoribulokinase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BS09_9GAMM rbh
Phosphoribulokinase {ECO:0000313|EMBL:AKH37078.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
04302015_21_scaffold_4_5
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4185..4661
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00036520B3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL74309.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
04302015_21_scaffold_4_6
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4782..5903
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IUI0_9GAMM rbh
hypothetical protein rbh
Tax=RBG_16_Gamma2_64_10_curated
04302015_21_scaffold_4_7
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6240..7286
DNA (1047bp) protein (349aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YEC6_THIV6 rbh
putative oxidoreductase, aryl-alcohol dehydrogenase like protein rbh
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:AFL75344.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
04302015_21_scaffold_4_8
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7319..7939)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI000373FBE1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIA54407.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
04302015_21_scaffold_4_9
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8165..8416
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K8I5_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ29105.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
04302015_21_scaffold_4_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8458..9129
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035CBEDA
TetR family transcriptional regulator
Tax=RBG_16_Gamma2_65_34_curated
04302015_21_scaffold_4_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9201..9830)
DNA (630bp) protein (210aa)
MarC family transcriptional regulator n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037CDFD5
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
04302015_21_scaffold_4_12
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10151..10435
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNQ1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR22850.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
04302015_21_scaffold_4_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10720..11232
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4N1_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE15215.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
04302015_21_scaffold_4_14
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11418..11924)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000381A2C9
Sel1 domain-containing protein {ECO:0000313|EMBL:AHX63666.1}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas media WS.;"
Sel1 domain-containing protein; K07126
04302015_21_scaffold_4_15
unknown

Not on your lists

comp(12320..12472)
DNA (153bp) protein (51aa)

This feature has no annotations

04302015_21_scaffold_4_16
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12469..12870)
DNA (402bp) protein (134aa)
Rieske [2Fe-2S] domain protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPP0_RHOCS
Rieske [2Fe-2S] domain-containing protein
Rieske [2Fe-2S] domain protein {ECO:0000313|EMBL:ACI99742.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
04302015_21_scaffold_4_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(13156..13656)
DNA (501bp) protein (167aa)
KHK; Ketohexokinase (EC:2.7.1.3)
Ketohexokinase (Hepatic fructokinase) {ECO:0000313|EMBL:CBE69596.1}; EC=2.7.1.3 {ECO:0000313|EMBL:CBE69596.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Ketohexokinase (Hepatic fructokinase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL1_9BACT
04302015_21_scaffold_4_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14162..14584
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCN0_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
04302015_21_scaffold_4_19
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14661..15212)
DNA (552bp) protein (184aa)
Putative phosphoesterase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z183_9GAMM
Putative phosphoesterase {ECO:0000313|EMBL:EIC21398.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
phosphodiesterase; K07095
04302015_21_scaffold_4_20
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15513..15866
DNA (354bp) protein (118aa)
DNA-binding protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036A07AE
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ACL73997.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
04302015_21_scaffold_4_21
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16109..16588)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036FBA0F
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
04302015_21_scaffold_4_22
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16821..17447
DNA (627bp) protein (209aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036BE690
ExsB family protein; K06920 queuosine biosynthesis protein QueC
04302015_21_scaffold_4_23
unknown

Not on your lists

17792..18160
DNA (369bp) protein (123aa)

This feature has no annotations

04302015_21_scaffold_4_24
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18302..20470
DNA (2169bp) protein (723aa)
DNA helicase II; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
DNA helicase II n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTC4_THISH rbh
Tax=RBG_16_Gammaproteobacteria_57_12_curated
04302015_21_scaffold_4_25
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20551..23397)
DNA (2847bp) protein (949aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036D5A96
hypothetical protein rbh
Tax=RBG_16_Gammaproteobacteria_57_12_curated
04302015_21_scaffold_4_26
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23908..24288)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036B4B2C
Uncharacterized protein {ECO:0000313|EMBL:EMR13650.1}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
hypothetical protein
04302015_21_scaffold_4_27
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24296..25021)
DNA (726bp) protein (242aa)
decarboxylase n=1 Tax=Thioalkalivibrio RepID=UPI00035E38D7 rbh
hypothetical protein; K06966 rbh
Uncharacterized protein {ECO:0000313|EMBL:ADC70562.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
04302015_21_scaffold_4_28
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25197..27914
DNA (2718bp) protein (906aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] rbh
DNA polymerase I n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035C0BC8 rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_21_scaffold_4_29
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28465..29100)
DNA (636bp) protein (212aa)
Putative uncharacterized protein id=1357069 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=CG_Rhodocyc_01
Displaying items 1-30 of 144 in total

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