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04302015_21_scaffold_48

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_48_1
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232..2064)
DNA (1833bp) protein (611aa)
glucosamine/fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] rbh
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C416_NITHN rbh
04302015_21_scaffold_48_2
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2206..3576)
DNA (1371bp) protein (457aa)
UDP-N-acetylglucosamine pyrophosphorylase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] rbh
Bifunctional protein GlmU n=1 Tax=Beggiatoa sp. PS RepID=A7BUI6_9GAMM rbh
Tax=RBG_16_Gammaproteobacteria_57_12_curated
04302015_21_scaffold_48_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3713..4204)
DNA (492bp) protein (164aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACP6_9PROT
FKBP-type peptidylprolyl isomerase
04302015_21_scaffold_48_4
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4382..4807)
DNA (426bp) protein (142aa)
ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase epsilon chain n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A4V3_METMM
Tax=RBG_16_Gammaproteobacteria_57_12_curated
04302015_21_scaffold_48_5
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4874..6250)
DNA (1377bp) protein (459aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
ATP synthase F1 subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] rbh
ATP synthase subunit beta n=1 Tax=Beggiatoa alba B18LD RepID=I3CK13_9GAMM rbh
04302015_21_scaffold_48_6
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6352..7212)
DNA (861bp) protein (287aa)
ATP synthase F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] rbh
ATP synthase gamma chain n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C420_NITHN rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
04302015_21_scaffold_48_7
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7250..8791)
DNA (1542bp) protein (514aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
ATP synthase F1 subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] rbh
ATP synthase subunit alpha n=2 Tax=sulfur-oxidizing symbionts RepID=G2D9T8_9GAMM rbh
04302015_21_scaffold_48_8
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8802..9341)
DNA (540bp) protein (180aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
F0F1 ATP synthase subunit delta n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035C1FDF
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
04302015_21_scaffold_48_9
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9406..9876)
DNA (471bp) protein (157aa)
ATP synthase F0F1 subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=2 Tax=Nitrosococcus oceani RepID=ATPF_NITOC
ATP synthase subunit b {ECO:0000255|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000255|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000255|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000255|HAMAP-Rule:MF_01398}; Short=F-ATPase subunit b {ECO:0000255|HAMAP-Rule:MF_01398};; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
04302015_21_scaffold_48_10
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9934..10233)
DNA (300bp) protein (100aa)
ATP synthase F0 C subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase F0, C subunit n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNZ9_9GAMM
Tax=RBG_16_Gammaproteobacteria_62_13__curated
04302015_21_scaffold_48_11
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10406..11185)
DNA (780bp) protein (260aa)
ATP synthase F0 subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] rbh
ATP synthase subunit a n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K4Q0_NITWC rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
04302015_21_scaffold_48_12
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11475..11828)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BP01_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR22950.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
04302015_21_scaffold_48_13
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12078..12530)
DNA (453bp) protein (151aa)
CBS domain containing membrane protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPJ1_9GAMM
signal-transduction protein
Tax=RBG_16_Gamma2_64_10_curated
04302015_21_scaffold_48_14
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12550..13431)
DNA (882bp) protein (294aa)
ParB-like partition protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4N7_9GAMM rbh
ParB-like partition protein {ECO:0000313|EMBL:EHQ52774.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
parB-like partition protein; K03497 chromosome partitioning protein, ParB family rbh
04302015_21_scaffold_48_15
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13421..14224)
DNA (804bp) protein (268aa)
Chromosome segregation ATPase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4N6_9GAMM rbh
Chromosome segregation ATPase {ECO:0000313|EMBL:EHQ52773.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
chromosome partitioning ATPase rbh
04302015_21_scaffold_48_16
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14364..15050)
DNA (687bp) protein (229aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
16S rRNA methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D15F7
Tax=RBG_16_Gamma2_64_10_curated
04302015_21_scaffold_48_17
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15050..16954)
DNA (1905bp) protein (635aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=MNMG_ALKEH rbh
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
04302015_21_scaffold_48_18
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17052..17720)
DNA (669bp) protein (223aa)
phosphoserine phosphatase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035F2CFC
HAD-superfamily hydrolase
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:ACL73494.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
04302015_21_scaffold_48_19
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17879..18400
DNA (522bp) protein (174aa)
dinucleoside polyphosphate hydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
RNA pyrophosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000255|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000255|HAMAP-Rule:MF_00298}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
RNA pyrophosphohydrolase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=RPPH_ALKEH
04302015_21_scaffold_48_20
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18464..20728
DNA (2265bp) protein (755aa)
phosphoenolpyruvate-protein phosphotransferase PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] rbh
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000378CA14 rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_21_scaffold_48_21
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20762..21286
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVH3_NITHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
04302015_21_scaffold_48_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21347..22441)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Marinobacter lipolyticus RepID=UPI0003765569
hypothetical protein; K07027
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_21_scaffold_48_23
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22608..26687)
DNA (4080bp) protein (1360aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BET7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:BAN69988.1}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
hypothetical protein
04302015_21_scaffold_48_24
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26937..27398
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ARh3 RepID=UPI00036CC38B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC70909.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
04302015_21_scaffold_48_25
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27782..29482
DNA (1701bp) protein (567aa)
Putative diguanylate cyclase (GGDEF domain) id=1304144 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
diguanylate cyclase rbh
Tax=GWC1_Azotobacter_66_9_curated
04302015_21_scaffold_48_26
unknown

Not on your lists

comp(29473..29733)
DNA (261bp) protein (87aa)

This feature has no annotations

04302015_21_scaffold_48_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29770..30615)
DNA (846bp) protein (282aa)
icc; cyclic AMP phosphodiesterase (EC:3.1.4.17)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=2 Tax=Pseudomonas RepID=I2BSC2_PSEFL
04302015_21_scaffold_48_28
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

30720..31382
DNA (663bp) protein (221aa)
O-methyltransferase family protein (EC:2.1.1.104)
O-methyltransferase family 3 {ECO:0000313|EMBL:AFY65456.1}; EC=2.1.1.104 {ECO:0000313|EMBL:AFY65456.1};; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
O-methyltransferase family 3 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S675_9CYAN
04302015_21_scaffold_48_29
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31406..32536)
DNA (1131bp) protein (377aa)
Phosphate transporter n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMC2_9GAMM rbh
Phosphate transporter {ECO:0000313|EMBL:EAR23460.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
phosphate transporter; K03306 inorganic phosphate transporter, PiT family rbh
04302015_21_scaffold_48_30
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32887..34230)
DNA (1344bp) protein (448aa)
N-acetylglutamate synthase (EC:2.3.1.1); K14682 amino-acid N-acetyltransferase [EC:2.3.1.1] rbh
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
N-acetylglutamate synthase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036428EC rbh
Displaying items 1-30 of 73 in total

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