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04302015_21_scaffold_89

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_89_1
unknown

Not on your lists

3..143
DNA (141bp) protein (47aa)

This feature has no annotations

04302015_21_scaffold_89_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158..502
DNA (345bp) protein (115aa)
Putative uncharacterized protein id=4445030 bin=GWC2_Nitrospirae-rel_56_14 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
04302015_21_scaffold_89_3
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

562..1941
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI00037A6A77 rbh
hypothetical protein rbh
Tax=RBG_16_Gammaproteobacteria_62_13__curated
04302015_21_scaffold_89_4
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2078..3313
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI00035FBDB4
Uncharacterized protein {ECO:0000313|EMBL:KGF72889.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
hypothetical protein rbh
04302015_21_scaffold_89_5
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3333..3593)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4CDB0
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
04302015_21_scaffold_89_6

Not on your lists

comp(3590..4165)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000379DF63
Uncharacterized protein {ECO:0000313|EMBL:KKM20061.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
04302015_21_scaffold_89_7
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4473..4754
DNA (282bp) protein (94aa)
Signal peptide protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZQ2_9PROT
Putative integral membrane protein {ECO:0000313|EMBL:KFZ89588.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
putative integral membrane protein
04302015_21_scaffold_89_8
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4992..5261
DNA (270bp) protein (90aa)
Putative signal peptide protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWS7_9PROT
signal peptide protein
Putative signal peptide protein {ECO:0000313|EMBL:AEK57722.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
04302015_21_scaffold_89_9
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5221..6135
DNA (915bp) protein (305aa)
UPF0276 protein UU5_11073 n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7R3_9GAMM
UPF0276 protein BN874_1740007 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
h16_A1821; hypothetical protein; K09930 hypothetical protein
04302015_21_scaffold_89_10
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6119..6892
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XHX2_9RALS
h16_A1820; hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
04302015_21_scaffold_89_11
unknown

Not on your lists

6933..7037
DNA (105bp) protein (35aa)

This feature has no annotations

04302015_21_scaffold_89_12
unknown

Not on your lists

7239..7466
DNA (228bp) protein (76aa)

This feature has no annotations

04302015_21_scaffold_89_13
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7521..9122)
DNA (1602bp) protein (534aa)
diguanylate cyclase n=1 Tax=Xanthomonas arboricola RepID=UPI0002D7F5A3 rbh
signal transduction protein rbh
Tax=CG_Mariprof_04
04302015_21_scaffold_89_14
unknown

Not on your lists

9328..9585
DNA (258bp) protein (86aa)

This feature has no annotations

04302015_21_scaffold_89_15
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9582..11717)
DNA (2136bp) protein (712aa)
hypothetical protein; K00520 mercuric reductase [EC:1.16.1.1] rbh
pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Azoarcus toluclasticus RepID=UPI00036C151F rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
04302015_21_scaffold_89_16

Not on your lists

comp(12090..12557)
DNA (468bp) protein (156aa)
copper-binding protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4AC86
Uncharacterized protein {ECO:0000313|EMBL:KKN89484.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
pcy; copper-binding plastocyanin like protein
04302015_21_scaffold_89_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12550..13581)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B707EA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETW93793.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
04302015_21_scaffold_89_18

Not on your lists

14229..14645
DNA (417bp) protein (139aa)
DoxX family protein id=3897366 bin=GWC2_Nitrospirae-rel_56_14 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Uncharacterized protein {ECO:0000313|EMBL:EQD62346.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
04302015_21_scaffold_89_19
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14719..15126
DNA (408bp) protein (136aa)
Transcriptional regulator, MerR family protein n=2 Tax=mine drainage metagenome RepID=T1CR62_9ZZZZ
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44897.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
resistance operon regulatory protein
04302015_21_scaffold_89_20
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15288..16307
DNA (1020bp) protein (340aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023J3_SOLUE
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
04302015_21_scaffold_89_21
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16557..17375)
DNA (819bp) protein (273aa)
Hopanoid-associated phosphorylase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K5F6_NITWC
hopanoid-associated phosphorylase
Hopanoid-associated phosphorylase {ECO:0000313|EMBL:ADJ28133.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
04302015_21_scaffold_89_22
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17461..19440)
DNA (1980bp) protein (660aa)
prenyltransferase and squalene oxidase repeat-containing protein; K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] rbh
Prenyltransferase and squalene oxidase repeats n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82VC6_NITEU rbh
Prenyltransferase and squalene oxidase repeats {ECO:0000313|EMBL:CAD85079.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
04302015_21_scaffold_89_23
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19500..20642)
DNA (1143bp) protein (381aa)
fdfT; squalene and phytoene synthase; K00801 farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] rbh
Squalene and phytoene synthases n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TD9_NITEU rbh
Squalene and phytoene synthases {ECO:0000313|EMBL:CAD85869.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
04302015_21_scaffold_89_24
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20711..22603)
DNA (1893bp) protein (631aa)
1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; EC=2.2.1.7 {ECO:0000255|HAMAP-Rule:MF_00315};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; Short=DXP synthase {ECO:0000255|HAMAP-Rule:MF_00315};; Short=DXPS {ECO:0000255|HAMAP-Rule:MF_00315};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=DXS_THISH
04302015_21_scaffold_89_25
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23297..24253
DNA (957bp) protein (319aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C075_NITHN rbh
04302015_21_scaffold_89_26
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24266..25390
DNA (1125bp) protein (375aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K5W1_NITWC rbh
hopanoid biosynthesis associated radical SAM protein HpnH rbh
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:ADJ28288.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
04302015_21_scaffold_89_27
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25452..26594
DNA (1143bp) protein (381aa)
Glycosyl transferase family 2 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C073_NITHN rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADE14399.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
04302015_21_scaffold_89_28
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26678..27325
DNA (648bp) protein (216aa)
Hopanoid biosynthesis associated membrane protein HpnM n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K5W0_NITWC
hopanoid biosynthesis associated membrane protein HpnM
Hopanoid biosynthesis associated membrane protein HpnM {ECO:0000313|EMBL:ADJ28287.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
04302015_21_scaffold_89_29
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27389..28252
DNA (864bp) protein (288aa)
Possible lipoprotein (VacJ) transmembrane n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZX1_9PROT
VacJ-like lipoprotein; K04754 lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
04302015_21_scaffold_89_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28653..29909)
DNA (1257bp) protein (419aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase id=1373440 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 37 in total

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