ggKbase home page

04302015_21_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 104 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_30_1
unknown

Not on your lists

3..68
DNA (66bp) protein (22aa)

This feature has no annotations

04302015_21_scaffold_30_2
unknown

Not on your lists

comp(424..582)
DNA (159bp) protein (53aa)

This feature has no annotations

04302015_21_scaffold_30_3
unknown

Not on your lists

comp(566..949)
DNA (384bp) protein (128aa)

This feature has no annotations

04302015_21_scaffold_30_4
unknown

Not on your lists

comp(946..1584)
DNA (639bp) protein (213aa)

This feature has no annotations

04302015_21_scaffold_30_5
GWA2_OD1_37_8, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1816..3069)
DNA (1254bp) protein (418aa)
Family 2 glycosyl transferase {ECO:0000313|EMBL:KKQ39665.1}; TaxID=1619036 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_37_8.;"
hypothetical protein id=14423763 bin=bin11_novelCP species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=bin11_novelCP organism_group=Unknown_CP
04302015_21_scaffold_30_6
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3279..3929)
DNA (651bp) protein (217aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
04302015_21_scaffold_30_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4203..4802
DNA (600bp) protein (200aa)
Isochorismatase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARR9_FERAC
Nicotinamidase/isochorismatase family protein {ECO:0000313|EMBL:AKB80807.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
isochorismatase
04302015_21_scaffold_30_8
R_RIF_OD1_11_46_22, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4829..6016
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CFBA0 rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22_curated
04302015_21_scaffold_30_9
unknown

Not on your lists

comp(6087..6653)
DNA (567bp) protein (189aa)

This feature has no annotations

04302015_21_scaffold_30_10
Parcubacteria bacterium GW2011_GWD1_42_9, Parcubacteria, Bacteria

Not on your lists

6853..7314
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002E1ADD2
YfiD {ECO:0000313|EMBL:KKS77586.1}; TaxID=1618938 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_42_9.;"
hypothetical protein
04302015_21_scaffold_30_11
GWB1_OD1_57_6, Parcubacteria, Bacteria

Not on your lists

comp(8055..10025)
DNA (1971bp) protein (657aa)
RNAse R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] id=5803430 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
RNAse R (EC:3.1.-.-) rbh
Ribonuclease R {ECO:0000313|EMBL:KKW45558.1}; TaxID=1618889 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_57_6.;"
04302015_21_scaffold_30_12
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

10223..10609
DNA (387bp) protein (129aa)
Cupin protein n=1 Tax=uncultured bacterium RepID=K1YKX9_9BACT
mannose-6-phosphate isomerase
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
04302015_21_scaffold_30_13
R_RIF_OD1_11_46_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

10742..11281
DNA (540bp) protein (180aa)
hypothetical protein id=120066 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_46_13_curated
04302015_21_scaffold_30_14
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

11352..12116
DNA (765bp) protein (255aa)
ABC transporter n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZKS7_9PSED
ABC transporter; K09687 antibiotic transport system ATP-binding protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
04302015_21_scaffold_30_15
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

12113..12889
DNA (777bp) protein (259aa)
Inner membrane transport permease n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7DG40_9ALTE
yadH; inner membrane transport permease yadH
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
04302015_21_scaffold_30_16
unknown

Not on your lists

13023..13472
DNA (450bp) protein (150aa)

This feature has no annotations

04302015_21_scaffold_30_17
unknown

Not on your lists

13552..14544
DNA (993bp) protein (331aa)

This feature has no annotations

04302015_21_scaffold_30_18
R_OD1_56_18, Parcubacteria, Bacteria

Not on your lists

14686..16479
DNA (1794bp) protein (598aa)
Uncharacterized protein (Fragment) id=1251244 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria rbh
GTP-binding protein TypA/BipA rbh
Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated
04302015_21_scaffold_30_19
unknown

Not on your lists

16649..17164
DNA (516bp) protein (172aa)

This feature has no annotations

04302015_21_scaffold_30_20
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

17192..18103
DNA (912bp) protein (304aa)
DSBA oxidoreductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MND7_HALMO
DSBA oxidoreductase
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
04302015_21_scaffold_30_21

Not on your lists

comp(18199..18819)
DNA (621bp) protein (207aa)
Putative membrane protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HI87_GLUDA
Uncharacterized protein {ECO:0000313|EMBL:KKW44782.1}; TaxID=1618859 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_56_21.;"
hypothetical protein
04302015_21_scaffold_30_22
RBG_13_OD1_Moranbacteria_45_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

18928..19497
DNA (570bp) protein (190aa)
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=88340 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RBG_13_OD1_Moranbacteria_45_13_curated
04302015_21_scaffold_30_23
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19504..20388
DNA (885bp) protein (295aa)
transmembrane_regions id=5803674 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
04302015_21_scaffold_30_24
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

20452..20910
DNA (459bp) protein (153aa)
hypothetical protein
Uncharacterized protein id=3544172 bin=GWA1_ZB2_49_26 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
04302015_21_scaffold_30_25
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

20961..21410
DNA (450bp) protein (150aa)
Vitamin K epoxide reductase n=1 Tax=uncultured bacterium RepID=K1YEC0_9BACT
hypothetical protein
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
04302015_21_scaffold_30_26
R_OD1_Kaiserbacteria_55_19, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

21451..22608
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1X1F6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_19_curated
04302015_21_scaffold_30_27
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

22621..24063
DNA (1443bp) protein (481aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase id=3423426 bin=GWA1_ZB2_49_26 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
04302015_21_scaffold_30_28
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

24060..24725
DNA (666bp) protein (222aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III id=2101180 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
04302015_21_scaffold_30_29
R_OD1_Kaiserbacteria_53_31, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

24972..25664
DNA (693bp) protein (231aa)
Haloacid dehalogenase, IB family protein n=1 Tax=uncultured bacterium RepID=K2FF01_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_53_31_curated
04302015_21_scaffold_30_30
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

25654..26649
DNA (996bp) protein (332aa)
HhH-GPD family protein; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-]
HhH-GPD family protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LP90_TREBD
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
Displaying items 1-30 of 104 in total

View Taxonomy