ggKbase home page

04302015_21_scaffold_1918

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_1918_1
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2..604)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZA8_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ78159.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
04302015_21_scaffold_1918_2
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(582..1499)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ19_9PLAN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ78157.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
04302015_21_scaffold_1918_3
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


1925..2128
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=UPI00001ACE79
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
04302015_21_scaffold_1918_4
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


2165..2518
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RP49_9PLAN
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
04302015_21_scaffold_1918_5
unknown

Not on your lists

comp(2661..2756)
DNA (96bp) protein (32aa)

This feature has no annotations

04302015_21_scaffold_1918_6
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


2831..3877
DNA (1047bp) protein (349aa)
phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] rbh
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2G0_PIRSD rbh
04302015_21_scaffold_1918_7
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(3878..5311)
DNA (1434bp) protein (478aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K12141 hydrogenase-4 component F [EC:1.-.-.-] rbh
Ech-hydrogenase-related complex, HyfF-like integral membrane subunit id=3959269 bin=GWF2_Planctomycetes_50_10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes rbh
Tax=GWF2_Planctomycetes_50_10_curated
04302015_21_scaffold_1918_8
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5315..5929)
DNA (615bp) protein (205aa)
NAD-dependent dehydrogenase subunit; K12140 hydrogenase-4 component E [EC:1.-.-.-]
NAD-dependent dehydrogenase subunit n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E6C3_GEOLS
NAD-dependent dehydrogenase subunit {ECO:0000313|EMBL:ACD96270.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
Displaying 8 items

View Taxonomy