ggKbase home page

04302015_21_scaffold_344

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_344_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

2..394
DNA (393bp) protein (131aa)
membrane-bound lytic murein transglycosylase D; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-]
LysM domain/NLP/P60 family protein id=24451526 bin=RBG_19FT_COMBO_GAL15_69_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(399..893)
DNA (495bp) protein (165aa)
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_3
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(956..2284)
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YJ51_9DELT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBX31305.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
Mg2+/Co2+ transporter
04302015_21_scaffold_344_4
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2297..3613)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YJ50_9DELT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBX31304.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
natural resistance-associated macrophage protein rbh
04302015_21_scaffold_344_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

4003..5505
DNA (1503bp) protein (501aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RD90_DESPD
NAD-dependent epimerase/dehydratase
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_6
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

5548..5979
DNA (432bp) protein (144aa)
Response regulator receiver protein id=2482663 bin=GWC2_Deltaproteobacteria_42_51 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Response regulator
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(5991..7991)
DNA (2001bp) protein (667aa)
Integral membrane sensor signal transduction histidine kinase id=3402722 bin=GWF2_Lentisphaerae_57_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
integral membrane sensor signal transduction histidine kinase rbh
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(8031..9635)
DNA (1605bp) protein (535aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RD90_DESPD rbh
NAD-dependent epimerase/dehydratase rbh
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(9780..10193)
DNA (414bp) protein (138aa)
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(10240..10800)
DNA (561bp) protein (187aa)
hydrogenase maturation protease; K08567 hydrogenase 2 maturation protease [EC:3.4.24.-]
Hydrogenase maturation protease n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7P0_ANADF
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(10910..12613)
DNA (1704bp) protein (568aa)
Nickel-dependent hydrogenase large subunit id=4794250 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
nickel-dependent hydrogenase large subunit rbh
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_12
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(12623..13171)
DNA (549bp) protein (183aa)
Polysulphide reductase NrfD id=4794249 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hybB-1; putative hydrogenase 2 b cytochrome subunit
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_13
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(13192..13782)
DNA (591bp) protein (197aa)
Polysulphide reductase NrfD n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG56_ANADF
polysulfide reductase NrfD
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_14
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(13779..14723)
DNA (945bp) protein (315aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=4794248 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
hydrogenase 2 protein HybA rbh
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(14725..15861)
DNA (1137bp) protein (379aa)
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6); K06282 hydrogenase small subunit [EC:1.12.99.6] rbh
Hydrogenase (NiFe) small subunit HydA n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG58_ANADF rbh
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_16
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

16252..16755
DNA (504bp) protein (168aa)
rubrerythrin n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3A662
rubrerythrin
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_17
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

16811..17596
DNA (786bp) protein (262aa)
exopolysaccharide synthesis protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B46
exopolysaccharide synthesis exod
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
04302015_21_scaffold_344_18
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(17874..19517)
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG60_CHLTF rbh
chaperonin GroL; K04077 chaperonin GroEL rbh
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(19530..19820)
DNA (291bp) protein (97aa)
10 kDa chaperonin id=2197768 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groS; chaperone Hsp10 (GroES), part of GroE chaperone system
Tax=RBG_13_Acidobacteria_68_16_curated
04302015_21_scaffold_344_20
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(20150..20641)
DNA (492bp) protein (164aa)
Glycosyl transferase, family 2 n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ER96_MODMB
glycosyl transferase family protein
Tax=RBG_13_Acidobacteria_68_16_curated
Displaying 20 items

View Taxonomy