ggKbase home page

04302015_24_scaffold_445

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_445_1
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114..830)
DNA (717bp) protein (239aa)
Cyclic nucleotide-binding protein id=4402807 bin=GWA2_Polynucleobacter_45_21 species=Polynucleobacter necessarius genus=Polynucleobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
cyclic nucleotide-binding protein rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_24_scaffold_445_2
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(827..1450)
DNA (624bp) protein (208aa)
Methyltransferase type 11 id=4402809 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Methyltransferase type 11
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_24_scaffold_445_3
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1485..2693)
DNA (1209bp) protein (403aa)
O-succinylhomoserine sulfhydrylase n=1 Tax=beta proteobacterium CB RepID=M1SGN4_9PROT rbh
O-succinylhomoserine sulfhydrylase rbh
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:AGG33559.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_24_scaffold_445_4
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2763..4301)
DNA (1539bp) protein (513aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=576611 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polyn
Amidophosphoribosyltransferase n=1 Tax=beta proteobacterium CB RepID=M1RSS1_9PROT rbh
Amidophosphoribosyltransferase rbh
04302015_24_scaffold_445_5
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4306..4872)
DNA (567bp) protein (189aa)
Colicin V production protein n=1 Tax=beta proteobacterium CB RepID=M1SVF4_9PROT rbh
Colicin V production protein rbh
Colicin V production protein {ECO:0000313|EMBL:AGG33561.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_24_scaffold_445_6
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4872..5678)
DNA (807bp) protein (269aa)
Sporulation domain-containing protein n=1 Tax=beta proteobacterium CB RepID=M1T3J2_9PROT rbh
sporulation domain-containing protein rbh
Sporulation domain-containing protein {ECO:0000313|EMBL:AGG33562.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_24_scaffold_445_7
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5682..6917)
DNA (1236bp) protein (412aa)
FolC bifunctional protein n=1 Tax=beta proteobacterium CB RepID=M1SNI1_9PROT
FolC bifunctional protein
FolC bifunctional protein {ECO:0000313|EMBL:AGG33563.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_24_scaffold_445_8
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7013..7900)
DNA (888bp) protein (296aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=576611 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus.;"
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=4402824 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
04302015_24_scaffold_445_9
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7923..8720)
DNA (798bp) protein (266aa)
Tryptophan synthase alpha chain id=4402827 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
trpA; tryptophan synthase, alpha subunit rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_24_scaffold_445_10
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8770..9963)
DNA (1194bp) protein (398aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
Tryptophan synthase beta chain n=1 Tax=beta proteobacterium CB RepID=M1SVF9_9PROT rbh
tryptophan synthase, beta subunit rbh
04302015_24_scaffold_445_11
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9996..10670)
DNA (675bp) protein (225aa)
N-(5'-phosphoribosyl)anthranilate isomerase id=4402835 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
Phosphoribosylanthranilate isomerase rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_24_scaffold_445_12
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10709..11536)
DNA (828bp) protein (276aa)
tRNA pseudouridine synthase A id=4402838 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
truA; tRNA pseudouridine synthase A rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_24_scaffold_445_13
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11545..12930)
DNA (1386bp) protein (462aa)
Tfp pilus assembly protein FimV-like protein n=1 Tax=beta proteobacterium CB RepID=M1SGP2_9PROT rbh
Tfp pilus assembly protein FimV-like protein rbh
Tfp pilus assembly protein FimV-like protein {ECO:0000313|EMBL:AGG33569.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_24_scaffold_445_14
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12930..14087)
DNA (1158bp) protein (386aa)
Aspartate-semialdehyde dehydrogenase id=4402845 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Aspartate-semialdehyde dehydrogenase
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_24_scaffold_445_15
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14128..15201)
DNA (1074bp) protein (358aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
3-isopropylmalate dehydrogenase n=1 Tax=beta proteobacterium CB RepID=M1SVG2_9PROT rbh
3-isopropylmalate dehydrogenase rbh
04302015_24_scaffold_445_16
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15225..15872)
DNA (648bp) protein (216aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=beta proteobacterium CB RepID=M1T3K2_9PROT rbh
leuD; isopropylmalate isomerase small subunit rbh
04302015_24_scaffold_445_17
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15890..16099)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=beta proteobacterium CB RepID=M1SNI8_9PROT
Entericidin EcnA/B family {ECO:0000313|EMBL:AKD25450.1}; TaxID=576611 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus.;"
hypothetical protein
04302015_24_scaffold_445_18
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16109..17518)
DNA (1410bp) protein (470aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=beta proteobacterium CB RepID=M1SGP6_9PROT rbh
isopropylmalate isomerase large subunit rbh
04302015_24_scaffold_445_19
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17537..18850)
DNA (1314bp) protein (438aa)
Citrate synthase id=4402859 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
gltA; type II citrate synthase rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_24_scaffold_445_20
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18933..19202)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=beta proteobacterium CB RepID=M1SVG7_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG33576.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_24_scaffold_445_21
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19199..19744)
DNA (546bp) protein (182aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:AKD25454.1}; TaxID=576611 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein
Succinate dehydrogenase subunit B id=4402863 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Displaying 21 items

View Taxonomy