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04302015_24_scaffold_498

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_498_1
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..519)
DNA (519bp) protein (173aa)
Putative TRAP C4-dicarboxylate transport system, DctQ subunit (Small permease component) n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QFY8_9RHIZ
putative TRAP C4-dicarboxylate transport system, DctQ subunit (small permease component)
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
04302015_24_scaffold_498_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

767..964
DNA (198bp) protein (66aa)
Heavy metal-translocating P-type ATPase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7X5_9RHIZ
heavy metal-translocating P-type ATPase
Heavy metal-translocating P-type ATPase {ECO:0000313|EMBL:AGK59734.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
04302015_24_scaffold_498_3
unknown

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comp(921..1271)
DNA (351bp) protein (117aa)

This feature has no annotations

04302015_24_scaffold_498_4
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1382..3430)
DNA (2049bp) protein (683aa)
cadmium-exporting ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
ATPase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9C01
Cadmium-exporting ATPase {ECO:0000313|EMBL:ABQ39165.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
04302015_24_scaffold_498_5
unknown

Not on your lists

comp(3442..3810)
DNA (369bp) protein (123aa)

This feature has no annotations

04302015_24_scaffold_498_6
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3807..4172)
DNA (366bp) protein (122aa)
adenylate cyclase protein; K01768 adenylate cyclase [EC:4.6.1.1]
Adenylate/guanylate cyclase (Fragment) n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F6J4_9RHIZ
Adenylate/guanylate cyclase {ECO:0000313|EMBL:EHS51622.1}; Flags: Fragment;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
04302015_24_scaffold_498_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4162..5160)
DNA (999bp) protein (333aa)
membrane-bound adenylate class-3/4/guanylyl cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
Probable membrane-bound adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KQC2_RHISN
Probable membrane-bound adenylate class-3/4/guanylyl cyclase {ECO:0000313|EMBL:ACP22280.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
04302015_24_scaffold_498_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5217..5588)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXK4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR76206.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
04302015_24_scaffold_498_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5585..8782)
DNA (3198bp) protein (1066aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMG5_XANP2
CzcA family heavy metal efflux protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ABS69208.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
04302015_24_scaffold_498_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8798..9781)
DNA (984bp) protein (328aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICX7_XANP2
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABS65870.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
04302015_24_scaffold_498_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9778..11091)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NSQ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32161.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
czcC1; putative cobalt-zinc-cadmium resistance outer membrane efflux protein CzcC; K15725 cobalt-zinc-cadmium resistance protein CzcC
04302015_24_scaffold_498_12
unknown

Not on your lists

comp(11167..11385)
DNA (219bp) protein (73aa)

This feature has no annotations

04302015_24_scaffold_498_13
unknown

Not on your lists

comp(11666..12070)
DNA (405bp) protein (135aa)

This feature has no annotations

04302015_24_scaffold_498_14
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12072..12281)
DNA (210bp) protein (70aa)
Zinc efflux system n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3N1_9RHIZ
Zinc efflux system {ECO:0000313|EMBL:CCV11937.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
czcD; cobalt-zinc-cadmium resistance protein CzcD; K03295 cation efflux system protein, CDF family
04302015_24_scaffold_498_15
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12374..12949
DNA (576bp) protein (192aa)
Putative secreted protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5RZR9_9PLAN
Putative secreted protein {ECO:0000313|EMBL:EMI24716.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
hypothetical protein
04302015_24_scaffold_498_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12946..15261
DNA (2316bp) protein (772aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B1P6_METEA rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
04302015_24_scaffold_498_17
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15263..15940
DNA (678bp) protein (226aa)
UPI0003D5EF2E related cluster n=1 Tax=unknown RepID=UPI0003D5EF2E
Iron reductase {ECO:0000313|EMBL:AKH18878.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
04302015_24_scaffold_498_18
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15928..16722
DNA (795bp) protein (265aa)
Bll4814 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89KT9_BRADU
hypothetical protein
Bll4814 protein {ECO:0000313|EMBL:BAC50079.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
04302015_24_scaffold_498_19
unknown

Not on your lists

16934..17185
DNA (252bp) protein (84aa)

This feature has no annotations

04302015_24_scaffold_498_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17778..17981)
DNA (204bp) protein (68aa)
Cytochrome c class I n=2 Tax=Chloroflexus RepID=A9WHU4_CHLAA
cytochrome c class I
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 20 items

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