ggKbase home page

04302015_24_scaffold_189

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_189_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105..899)
DNA (795bp) protein (265aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXJ7_9BURK rbh
histidine kinase rbh
04302015_24_scaffold_189_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(896..2326)
DNA (1431bp) protein (477aa)
Bifunctional protein GlmU n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4J5_9BURK rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
UDP-N-acetylglucosamine pyrophosphorylase rbh
04302015_24_scaffold_189_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2495..3250)
DNA (756bp) protein (252aa)
Crp/Fnr family transcription regulator n=1 Tax=Acidovorax radicis RepID=UPI000237637D rbh
cyclic nucleotide-binding protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
04302015_24_scaffold_189_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3390..3788
DNA (399bp) protein (133aa)
BLUF domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4J7_9BURK
BLUF domain-containing protein {ECO:0000313|EMBL:EHL20445.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
BLUF domain-containing protein
04302015_24_scaffold_189_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3785..4351)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I583_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
04302015_24_scaffold_189_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4474..5469
DNA (996bp) protein (332aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002376383 rbh
LysR family transcriptional regulator rbh
Tax=GWA2_Burkholderiales_64_37_curated
04302015_24_scaffold_189_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5566..6798)
DNA (1233bp) protein (411aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
tyrosyl-tRNA ligase (EC:6.1.1.1) rbh
Tyrosine--tRNA ligase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8L5_ACIDE rbh
04302015_24_scaffold_189_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7001..8305
DNA (1305bp) protein (435aa)
Peptidase M23 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8L6_ACIDE rbh
Peptidase M23 {ECO:0000313|EMBL:EER59177.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
peptidase M23B rbh
04302015_24_scaffold_189_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8492..9463
DNA (972bp) protein (324aa)
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8L7_ACIDE rbh
anmK; anhydro-N-acetylmuramic acid kinase rbh
Tax=GWA2_Burkholderiales_64_37_curated
04302015_24_scaffold_189_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9485..9850)
DNA (366bp) protein (122aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8L8_ACIDE
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
iron-sulfur cluster insertion protein ErpA
04302015_24_scaffold_189_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10152..10544)
DNA (393bp) protein (131aa)
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=12550468 bin=BDI species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
04302015_24_scaffold_189_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10556..10987)
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4K9_9BURK
rplM; 50S ribosomal protein L13
Tax=GWA2_Burkholderiales_64_37_curated
04302015_24_scaffold_189_13
unknown

Not on your lists

11270..12037
DNA (768bp) protein (256aa)

This feature has no annotations

04302015_24_scaffold_189_14
unknown

Not on your lists

12268..12495
DNA (228bp) protein (76aa)

This feature has no annotations

04302015_24_scaffold_189_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13409..14407
DNA (999bp) protein (333aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5U4_ACIDE rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
04302015_24_scaffold_189_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14489..15154)
DNA (666bp) protein (222aa)
Rare lipoprotein A n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C181_DELAS
rare lipoprotein A; K03642 rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:ABX38544.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
04302015_24_scaffold_189_17
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15279..16130)
DNA (852bp) protein (284aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] rbh
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Methylenetetrahydrofolate reductase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MD47_ACIET rbh
04302015_24_scaffold_189_18
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16127..17125)
DNA (999bp) protein (333aa)
cell division protein FtsJ n=1 Tax=Acidovorax radicis RepID=UPI0002376390 rbh
ribosomal RNA methyltransferase RrmJ/FtsJ rbh
Tax=GWA2_Burkholderiales_64_37_curated
04302015_24_scaffold_189_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17404..18840)
DNA (1437bp) protein (479aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1) rbh
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Adenosylhomocysteinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEE2_9BURK rbh
04302015_24_scaffold_189_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19148..20776
DNA (1629bp) protein (543aa)
peptide chain release factor 3 n=1 Tax=Acidovorax radicis RepID=UPI0002376395 rbh
prfC; peptide chain release factor 3 rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
04302015_24_scaffold_189_21
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20788..21630
DNA (843bp) protein (281aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5V5_ACIDE rbh
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EER60153.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
HAD family hydrolase; K07024 rbh
04302015_24_scaffold_189_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21688..21969
DNA (282bp) protein (94aa)
Uncharacterized protein (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5V6_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER60154.1}; Flags: Fragment;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
04302015_24_scaffold_189_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22049..23014)
DNA (966bp) protein (322aa)
hypothetical protein id=12550452 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
04302015_24_scaffold_189_24
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23126..24043)
DNA (918bp) protein (306aa)
Polyphosphate kinase 2, PA0141 family n=1 Tax=Acidovorax sp. CF316 RepID=J0KLX3_9BURK rbh
Polyphosphate kinase 2, PA0141 family {ECO:0000313|EMBL:EJE54615.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein rbh
04302015_24_scaffold_189_25
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24164..24433)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9B7_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER58930.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
04302015_24_scaffold_189_26
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24445..25104)
DNA (660bp) protein (220aa)
Cytochrome c oxidase subunit III n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9B8_ACIDE rbh
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EER58931.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
additional subunit of nitric oxide reductase (Nor) complex, membrane protein; K02164 nitric oxide reductase NorE protein
04302015_24_scaffold_189_27
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25311..25736
DNA (426bp) protein (142aa)
Putative nitric-oxide reductase subunit C n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9B9_ACIDE
Putative nitric-oxide reductase subunit C {ECO:0000313|EMBL:EER58932.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
norC; cytochrome c subunit of NO reductase, NorC; K02305 nitric oxide reductase subunit C
04302015_24_scaffold_189_28
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25778..27211
DNA (1434bp) protein (478aa)
Nitric-oxide reductase {ECO:0000313|EMBL:EER58933.1}; EC=1.7.2.5 {ECO:0000313|EMBL:EER58933.1};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
cytochrome c oxidase subunit I; K04561 nitric oxide reductase subunit B [EC:1.7.2.5] rbh
Nitric-oxide reductase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9C0_ACIDE rbh
04302015_24_scaffold_189_29
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27214..28068
DNA (855bp) protein (285aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7Z3_LEPCP rbh
ATPase AAA {ECO:0000313|EMBL:KJA12063.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
ATPase; K04748 nitric oxide reductase NorQ protein rbh
04302015_24_scaffold_189_30
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28031..29086
DNA (1056bp) protein (352aa)
Iron-sulfur cluster-binding protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TCH7_ACIDE rbh
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EER57820.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
iron-sulfur cluster-binding protein rbh
Displaying items 1-30 of 48 in total

View Taxonomy