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04302015_24_scaffold_292

Search features with annotation key words

Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_292_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..411
DNA (411bp) protein (137aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax de
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4Y2_ACIDE
04302015_24_scaffold_292_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

458..1924
DNA (1467bp) protein (489aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Glutamate--tRNA ligase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4Y3_ACIDE rbh
gltX; glutamyl-tRNA ligase rbh
04302015_24_scaffold_292_trna_1
unknown

Not on your lists

1987..2059
DNA (73bp)
transferRNA
04302015_24_scaffold_292_trna_2
unknown

Not on your lists

2100..2172
DNA (73bp)
transferRNA
04302015_24_scaffold_292_trna_3
unknown

Not on your lists

2226..2299
DNA (74bp)
transferRNA
04302015_24_scaffold_292_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2461..3219)
DNA (759bp) protein (253aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002376A58 rbh
3-hydroxy-2-methylbutyryl-CoA dehydrogenase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
04302015_24_scaffold_292_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3360..4421)
DNA (1062bp) protein (354aa)
Extracellular solute-binding protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C2V7_9BURK rbh
family 1 extracellular solute-binding protein rbh
Extracellular solute-binding protein {ECO:0000313|EMBL:EHL21032.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
04302015_24_scaffold_292_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4816..5940
DNA (1125bp) protein (375aa)
Integrase family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQG6_ALIDB
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADV01321.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
04302015_24_scaffold_292_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6002..7411)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1J0_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EER61658.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
DNA primase TraC
04302015_24_scaffold_292_7
unknown

Not on your lists

comp(7920..8186)
DNA (267bp) protein (89aa)

This feature has no annotations

04302015_24_scaffold_292_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8186..8827)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1J2_ACIDE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
04302015_24_scaffold_292_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8909..11089)
DNA (2181bp) protein (727aa)
MobA/MobL protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1K5_ACIDE rbh
conjugal transfer relaxase TraA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
04302015_24_scaffold_292_10
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11549..14569)
DNA (3021bp) protein (1007aa)
type III restriction enzyme (EC:3.1.21.5); K01156 type III restriction enzyme [EC:3.1.21.5] rbh
Type III restriction enzyme n=1 Tax=Pseudomonas sp. Chol1 RepID=K5YSE6_9PSED rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_24_scaffold_292_11
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14566..15663)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Thauera sp. 28 RepID=N6YQH9_9RHOO rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_24_scaffold_292_12
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(15663..17699)
DNA (2037bp) protein (679aa)
Uncharacterized protein n=2 Tax=Fusobacterium nucleatum subsp. animalis RepID=R9RBY4_FUSNU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGM23714.1}; TaxID=469607 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. animalis 4_8.;"
04302015_24_scaffold_292_13
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17775..18479)
DNA (705bp) protein (235aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DGJ0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_24_scaffold_292_14
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18476..21811)
DNA (3336bp) protein (1112aa)
Helicase domain protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5YSE0_9PSED rbh
Helicase domain protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_24_scaffold_292_15
unknown

Not on your lists

comp(22084..22989)
DNA (906bp) protein (302aa)

This feature has no annotations

04302015_24_scaffold_292_16
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22991..24304)
DNA (1314bp) protein (438aa)
MT-A70 family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BU10_9BURK rbh
MT-A70 family protein {ECO:0000313|EMBL:EHL24144.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
MT-A70 family protein
04302015_24_scaffold_292_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24746..25888)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4Z5_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20321.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
04302015_24_scaffold_292_18
unknown

Not on your lists

26160..26471
DNA (312bp) protein (104aa)

This feature has no annotations

04302015_24_scaffold_292_19
unknown

Not on your lists

comp(26468..27130)
DNA (663bp) protein (221aa)

This feature has no annotations

04302015_24_scaffold_292_trna_4
unknown

Not on your lists

comp(27147..27220)
DNA (74bp)
transferRNA
04302015_24_scaffold_292_20
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28181..29353
DNA (1173bp) protein (391aa)
Sodium/hydrogen exchanger n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1Y2_ACIDE
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EER61577.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
sodium/hydrogen exchanger
04302015_24_scaffold_292_21
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29470..31329)
DNA (1860bp) protein (620aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBW5_ACIDE rbh
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:EER58031.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
peptidase M14, carboxypeptidase A rbh
04302015_24_scaffold_292_22
unknown

Not on your lists

31483..32046
DNA (564bp) protein (188aa)

This feature has no annotations

04302015_24_scaffold_292_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32036..33802)
DNA (1767bp) protein (589aa)
RNA helicase n=1 Tax=Acidovorax radicis RepID=UPI0002377BC4 rbh
DEAD/DEAH box helicase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
04302015_24_scaffold_292_24
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34046..35707
DNA (1662bp) protein (554aa)
ABC transporter related protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T949_ACIDE rbh
ABC transporter ATP-binding protein rbh
ABC transporter related protein {ECO:0000313|EMBL:EER58996.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
04302015_24_scaffold_292_25
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35769..38189
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T950_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EER58997.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein rbh
04302015_24_scaffold_292_26
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38262..39584)
DNA (1323bp) protein (441aa)
TRAP transporter solute receptor TAXI family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T951_ACIDE rbh
TRAP transporter solute receptor TAXI family protein {ECO:0000313|EMBL:EER58998.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
TRAP transporter solute receptor TAXI family protein rbh
Displaying items 1-30 of 39 in total

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