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04302015_24_scaffold_560

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_560_1
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..758)
DNA (756bp) protein (252aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Methylotenera RepID=UPI00037DEBCD
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:EUJ10794.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial
04302015_24_scaffold_560_2
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(767..1243)
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WWQ3_METML
04302015_24_scaffold_560_3
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1240..2055)
DNA (816bp) protein (272aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] rbh
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=583345 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 /
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WWQ4_METML rbh
04302015_24_scaffold_560_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2129..3592
DNA (1464bp) protein (488aa)
kaiC; putative circadian clock protein, KaiC superfamily ATPase (EC:2.7.11.1); K08482 circadian clock protein KaiC rbh
Putative circadian clock protein, KaiC n=1 Tax=Geobacter sp. (strain FRC-32) RepID=B9M6C3_GEOSF id=5224441 bin=16ft_combo_ws3_JS1 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KCZ71450.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
04302015_24_scaffold_560_5
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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3589..3858
DNA (270bp) protein (90aa)
Thiol-disulfide isomerase id=2706406 bin=GWF2_Lentisphaerae_57_35 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
KaiB domain-containing protein
Tax=GWF2_Lentisphaerae_57_35_curated
04302015_24_scaffold_560_6
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3889..5664
DNA (1776bp) protein (592aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K693_NITWC
GAF/PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Gamma2_64_11_curated
04302015_24_scaffold_560_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5669..6157)
DNA (489bp) protein (163aa)
Arsenate reductase {ECO:0000313|EMBL:CKI20374.1}; EC=1.20.4.- {ECO:0000313|EMBL:CKI20374.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
arsenate reductase; K03741 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=1 Tax=Achromobacter piechaudii HLE RepID=J4J988_9BURK
04302015_24_scaffold_560_8
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6422..7213
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WXF1_METML rbh
hypothetical protein rbh
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
04302015_24_scaffold_560_9
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7352..7978
DNA (627bp) protein (209aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DPL3_METS0
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ADI29257.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
04302015_24_scaffold_560_10
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7985..8251)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XCZ1_METSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT50416.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
04302015_24_scaffold_560_11
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8589..11201
DNA (2613bp) protein (871aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GEZ6_NITSI rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AEJ01128.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
04302015_24_scaffold_560_12
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11252..12253)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Methylophaga lonarensis MPL RepID=M7P3E6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CEN56438.1}; TaxID=1581680 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium MMS-10A-171.;"
hypothetical protein
04302015_24_scaffold_560_13
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12434..13300
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI00037C58D0 rbh
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
04302015_24_scaffold_560_14
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13551..15428)
DNA (1878bp) protein (626aa)
methanol dehydrogenase n=1 Tax=Methylotenera mobilis RepID=UPI00036B3FFD rbh
PQQ-dependent dehydrogenase rbh
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
04302015_24_scaffold_560_15
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15883..16194)
DNA (312bp) protein (104aa)
ammonium transporter n=1 Tax=Methylotenera mobilis RepID=UPI00035DEC2C
Rh family protein/ammonium transporter {ECO:0000313|EMBL:CEN55712.1}; TaxID=1581680 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium MMS-10A-171.;"
Rh family protein/ammonium transporter
Displaying 15 items

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