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04302015_24_scaffold_7

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Displaying items 1-30 of 525 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_7_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201..1202)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128I1_POLSJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE45061.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_7_2
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1285..2205)
DNA (921bp) protein (307aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase associated with various cellular activities, AAA_3 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128I2_POLSJ
ATPase associated with various cellular activities, AAA_3 {ECO:0000313|EMBL:ABE45060.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_7_3
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2235..3188
DNA (954bp) protein (318aa)
Histone deacetylase superfamily n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLK7_POLNA rbh
histone deacetylase superfamily protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_7_4
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3243..4031
DNA (789bp) protein (263aa)
Enoyl-CoA hydratase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLK8_POLNA rbh
enoyl-CoA hydratase/isomerase rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_7_5
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4016..5347
DNA (1332bp) protein (444aa)
MscS Mechanosensitive ion channel n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128I4_POLSJ rbh
mechanosensitive ion channel protein MscS rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABE45058.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_7_6
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5388..6680)
DNA (1293bp) protein (431aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F6A34C rbh
hypothetical protein rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_24_scaffold_7_7
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6677..7162)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E01CA1
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_24_scaffold_7_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7247..8257)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E8D38C rbh
extracellular solute-binding protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_24_scaffold_7_9
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8636..9385
DNA (750bp) protein (250aa)
Electron transfer flavoprotein beta-subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128I5_POLSJ
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_7_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9492..10424
DNA (933bp) protein (311aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128I6_POLSJ rbh
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit rbh
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:ABE45056.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_7_11
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10518..12308
DNA (1791bp) protein (597aa)
acyl-CoA dehydrogenase-like protein; K00257 [EC:1.3.99.-] rbh
Acyl-CoA dehydrogenase n=1 Tax=Polaromonas sp. CF318 RepID=J3D3U3_9BURK rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJL83986.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
04302015_24_scaffold_7_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12412..13365
DNA (954bp) protein (318aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase, NPD n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128I8_POLSJ
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:ABE45054.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_7_13
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13378..14475
DNA (1098bp) protein (366aa)
Acyltransferase 3 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128I9_POLSJ rbh
acyltransferase 3 rbh
Acyltransferase 3 {ECO:0000313|EMBL:ABE45053.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_7_14
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14634..15722
DNA (1089bp) protein (363aa)
DNA repair photolyase n=1 Tax=Polaromonas sp. CF318 RepID=J3D3J8_9BURK rbh
DNA repair photolyase {ECO:0000313|EMBL:EJL83974.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
radical SAM family protein rbh
04302015_24_scaffold_7_15
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15727..16596)
DNA (870bp) protein (290aa)
carboxylesterase (EC:3.1.1.1); K01070 S-formylglutathione hydrolase [EC:3.1.2.12] rbh
S-formylglutathione hydrolase n=1 Tax=Polaromonas sp. CF318 RepID=J3D3J3_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
04302015_24_scaffold_7_16
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16593..17507)
DNA (915bp) protein (305aa)
Alpha/beta hydrolase fold protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CU02_VARPS rbh
alpha/beta hydrolase fold protein rbh
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
04302015_24_scaffold_7_17
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17524..18630)
DNA (1107bp) protein (369aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
zinc-binding alcohol dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] rbh
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Polaromonas sp. CF318 RepID=J2LFP3_9BURK rbh
04302015_24_scaffold_7_18
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18869..20014)
DNA (1146bp) protein (382aa)
Chaperone protein DnaJ n=1 Tax=Polaromonas sp. CF318 RepID=J3D3S8_9BURK rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ rbh
04302015_24_scaffold_7_19
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20129..22066)
DNA (1938bp) protein (646aa)
Chaperone protein DnaK n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=DNAK_POLNA rbh
Chaperone protein DnaK {ECO:0000255|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000255|HAMAP-Rule:MF_00332}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK rbh
04302015_24_scaffold_7_20
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22203..22763)
DNA (561bp) protein (187aa)
Protein GrpE n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=GRPE_POLSJ
heat shock protein GrpE; K03687 molecular chaperone GrpE
Protein GrpE {ECO:0000255|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000255|HAMAP-Rule:MF_01151}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_7_21
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23019..23342)
DNA (324bp) protein (108aa)
Putative transcriptional regulator n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128K8_POLSJ
putative transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_7_22
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23530..24009)
DNA (480bp) protein (160aa)
Transcriptional regulator, MarR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2Q5_RAMTT
MarR family transcriptional regulator
Transcriptional regulator, MarR family-like protein {ECO:0000313|EMBL:AEG93601.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
04302015_24_scaffold_7_23
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24015..25724)
DNA (1710bp) protein (570aa)
Acyl-CoA dehydrogenase-like protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128L0_POLSJ rbh
acyl-CoA dehydrogenase-like protein rbh
Tax=GWA2_Curvibacter_64_110_curated
04302015_24_scaffold_7_24
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25729..26472)
DNA (744bp) protein (248aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222N0_RHOFD rbh
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_7_25
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26478..28244)
DNA (1767bp) protein (589aa)
metal-dependent hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI000369C812 rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_7_26
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28246..29286)
DNA (1041bp) protein (347aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKE2_POLNA rbh
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_7_27
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29374..30513)
DNA (1140bp) protein (380aa)
Extracellular ligand-binding receptor n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y359_LEPCP rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACB33262.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
04302015_24_scaffold_7_28
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30596..31360)
DNA (765bp) protein (255aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B042A rbh
short-chain dehydrogenase/reductase SDR rbh
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
04302015_24_scaffold_7_29
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31357..33240)
DNA (1884bp) protein (628aa)
long-chain-fatty-acid--CoA ligase; K12508 feruloyl-CoA synthase [EC:6.2.1.34] rbh
Long-chain-fatty-acid--CoA ligase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2Q3_RAMTT rbh
Long-chain-fatty-acid--CoA ligase-like protein {ECO:0000313|EMBL:AEG93599.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
04302015_24_scaffold_7_30
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33270..34064)
DNA (795bp) protein (265aa)
enoyl-CoA hydratase (EC:4.2.1.17) rbh
Vanillin synthase / trans-feruloyl-CoA hydratase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128L7_POLSJ rbh
Vanillin synthase / trans-feruloyl-CoA hydratase {ECO:0000313|EMBL:ABE45025.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Displaying items 1-30 of 525 in total

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