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04302015_24_scaffold_59

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Displaying items 1-30 of 151 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_24_scaffold_59_1
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204..1148
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036AC53B rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL89540.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
LysR family transcriptional regulator rbh
04302015_24_scaffold_59_2
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1145..1624)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0003610F9B
tRNA/rRNA methyltransferase SpoU
Tax=GWA2_Curvibacter_64_110_curated
04302015_24_scaffold_59_3
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1650..2384)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E49_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43193.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_59_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2440..3336
DNA (897bp) protein (299aa)
biotin synthesis protein BioC; K02169 malonyl-CoA O-methyltransferase [EC:2.1.1.197] rbh
Biotin synthesis protein BioC n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E48_POLSJ rbh
Biotin synthesis protein BioC {ECO:0000313|EMBL:ABE43194.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_59_5
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3377..3982
DNA (606bp) protein (202aa)
Putative transmembrane protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E47_POLSJ
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ABE43195.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_59_6
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4123..5328
DNA (1206bp) protein (402aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Cytochrome c oxidase subunit 2 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E46_POLSJ rbh
04302015_24_scaffold_59_7
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5424..7058
DNA (1635bp) protein (545aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] rbh
Cytochrome c oxidase, subunit I n=1 Tax=Polaromonas sp. CF318 RepID=J3DEU1_9BURK rbh
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:EJL90504.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
04302015_24_scaffold_59_8
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7084..7197
DNA (114bp) protein (38aa)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_24_scaffold_59_9
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7201..7815
DNA (615bp) protein (205aa)
Cytochrome c oxidase assembly protein CtaG/Cox11 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E44_POLSJ rbh
cytochrome c oxidase assembly protein; K02258 cytochrome c oxidase assembly protein subunit 11 rbh
Cytochrome c oxidase assembly protein CtaG/Cox11 {ECO:0000313|EMBL:ABE43198.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_59_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7812..8021
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKM0_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM36198.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_24_scaffold_59_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8086..8967
DNA (882bp) protein (294aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase, subunit III n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKM1_POLNA
Cytochrome c oxidase, subunit III {ECO:0000313|EMBL:ABM36199.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_24_scaffold_59_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9124..9345)
DNA (222bp) protein (74aa)
Putative transmembrane protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E41_POLSJ
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_24_scaffold_59_13
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9364..10110
DNA (747bp) protein (249aa)
Putative transmembrane cytochrome oxidase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E40_POLSJ
putative transmembrane cytochrome oxidase
Putative transmembrane cytochrome oxidase {ECO:0000313|EMBL:ABE43202.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_59_14
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10282..10851
DNA (570bp) protein (190aa)
Putative membrane protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E39_POLSJ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_59_15
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11000..12160
DNA (1161bp) protein (387aa)
Cytochrome oxidase assembly n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E38_POLSJ rbh
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA {ECO:0000313|EMBL:CDS51192.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 rbh
04302015_24_scaffold_59_16
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12157..13074
DNA (918bp) protein (306aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] rbh
Protoheme IX farnesyltransferase n=1 Tax=Polaromonas sp. CF318 RepID=J2LE90_9BURK rbh
04302015_24_scaffold_59_17
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13071..13703
DNA (633bp) protein (211aa)
SCO1/SenC/PrrC protein n=1 Tax=Polaromonas sp. CF318 RepID=J3DET4_9BURK rbh
SCO1/SenC/PrrC protein {ECO:0000313|EMBL:EJL90494.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
electron transport protein SCO1/SenC; K07152
04302015_24_scaffold_59_18
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13820..14764)
DNA (945bp) protein (315aa)
RNA polymerase sigma factor RpoH n=1 Tax=Polaromonas sp. CF318 RepID=J2UGH3_9BURK rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
sigma 32 (RpoH); K03089 RNA polymerase sigma-32 factor rbh
04302015_24_scaffold_59_19
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15142..15438)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E19_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43223.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_59_20
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15520..15981)
DNA (462bp) protein (154aa)
Putative membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J3DET9_9BURK
Putative membrane protein {ECO:0000313|EMBL:EJL90486.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
04302015_24_scaffold_59_21
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16064..17080)
DNA (1017bp) protein (339aa)
Malate/lactate dehydrogenase n=1 Tax=Polaromonas sp. CF318 RepID=J3DES8_9BURK rbh
Malate/lactate dehydrogenase {ECO:0000313|EMBL:EJL90484.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
malate/L-lactate dehydrogenase rbh
04302015_24_scaffold_59_22
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17093..18226)
DNA (1134bp) protein (378aa)
Signal recognition particle receptor FtsY n=1 Tax=Polaromonas sp. CF318 RepID=J2UGF8_9BURK rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor rbh
04302015_24_scaffold_59_23
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18255..19721
DNA (1467bp) protein (489aa)
Peptidase M16-like protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E13_POLSJ
peptidase M16-like protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_24_scaffold_59_24
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19778..21136
DNA (1359bp) protein (453aa)
peptidase M16-like protein; K01422 [EC:3.4.99.-] rbh
Peptidase M16-like protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E12_POLSJ rbh
Peptidase M16-like protein {ECO:0000313|EMBL:ABE43230.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_59_25
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21188..21850
DNA (663bp) protein (221aa)
RNA methyltransferase, RsmD family n=1 Tax=Polaromonas sp. CF318 RepID=J3DES1_9BURK rbh
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EJL90474.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein rbh
04302015_24_scaffold_59_26
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21905..22408
DNA (504bp) protein (168aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Phosphopantetheine adenylyltransferase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKN4_POLNA
04302015_24_scaffold_59_27
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22411..22692
DNA (282bp) protein (94aa)
PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like n=1 Tax=Bos taurus RepID=UPI00023AD754
ferredoxin-like
Tax=GWA2_Curvibacter_64_110_curated
04302015_24_scaffold_59_28
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23272..23898)
DNA (627bp) protein (209aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Peptidyl-tRNA hydrolase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKN6_POLNA
04302015_24_scaffold_59_29
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24044..24742)
DNA (699bp) protein (233aa)
50S ribosomal protein L25 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=RL25_POLSJ rbh
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 rbh
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_24_scaffold_59_30
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24827..25801)
DNA (975bp) protein (325aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polar
Ribose-phosphate pyrophosphokinase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DZ9_POLSJ
Displaying items 1-30 of 151 in total

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